Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
BdnfP21237 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC15.7■□□□□ 0.1
BdnfP21237 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
BdnfP21237 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC15.7■□□□□ 0.1
BdnfP21237 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
BdnfP21237 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
BdnfP21237 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
BdnfP21237 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
BdnfP21237 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
BdnfP21237 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
BdnfP21237 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
BdnfP21237 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
BdnfP21237 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
BdnfP21237 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
BdnfP21237 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC15.69■□□□□ 0.1
BdnfP21237 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC15.69■□□□□ 0.1
BdnfP21237 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
BdnfP21237 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
BdnfP21237 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
BdnfP21237 Gm7791-201ENSMUST00000219066 539 ntBASIC15.69■□□□□ 0.1
BdnfP21237 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
BdnfP21237 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
BdnfP21237 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
BdnfP21237 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
BdnfP21237 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
BdnfP21237 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
BdnfP21237 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
BdnfP21237 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
BdnfP21237 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
BdnfP21237 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
BdnfP21237 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
BdnfP21237 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC15.68■□□□□ 0.1
BdnfP21237 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
BdnfP21237 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
BdnfP21237 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
BdnfP21237 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC15.68■□□□□ 0.1
BdnfP21237 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC15.68■□□□□ 0.1
BdnfP21237 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
BdnfP21237 Gm22240-201ENSMUST00000175225 82 ntBASIC15.68■□□□□ 0.1
BdnfP21237 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
BdnfP21237 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
BdnfP21237 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
BdnfP21237 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC15.68■□□□□ 0.1
BdnfP21237 Il3ra-202ENSMUST00000223589 738 ntBASIC15.68■□□□□ 0.1
BdnfP21237 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
BdnfP21237 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
BdnfP21237 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
BdnfP21237 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
BdnfP21237 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
BdnfP21237 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
BdnfP21237 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
BdnfP21237 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
BdnfP21237 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
BdnfP21237 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
BdnfP21237 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
BdnfP21237 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
BdnfP21237 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
BdnfP21237 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
BdnfP21237 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
BdnfP21237 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
BdnfP21237 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
BdnfP21237 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
BdnfP21237 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
BdnfP21237 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
BdnfP21237 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
BdnfP21237 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
BdnfP21237 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
BdnfP21237 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
BdnfP21237 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
BdnfP21237 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
BdnfP21237 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
BdnfP21237 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
BdnfP21237 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
BdnfP21237 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
BdnfP21237 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
BdnfP21237 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
BdnfP21237 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
BdnfP21237 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
BdnfP21237 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
BdnfP21237 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
BdnfP21237 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
BdnfP21237 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
BdnfP21237 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
BdnfP21237 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
BdnfP21237 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
BdnfP21237 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
BdnfP21237 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
BdnfP21237 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC15.66■□□□□ 0.1
BdnfP21237 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
BdnfP21237 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
BdnfP21237 Gm18958-201ENSMUST00000174258 762 ntBASIC15.66■□□□□ 0.1
BdnfP21237 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
BdnfP21237 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
BdnfP21237 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
BdnfP21237 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
BdnfP21237 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
BdnfP21237 Gm10812-201ENSMUST00000099864 546 ntBASIC15.66■□□□□ 0.1
BdnfP21237 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
BdnfP21237 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
BdnfP21237 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC15.66■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms