Protein–RNA interactions for Protein: P10146

Ccl1, C-C motif chemokine 1, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl1P10146 Gm6365-201ENSMUST00000054711 744 ntBASIC12.77□□□□□ -0.37
Ccl1P10146 Mtag2-201ENSMUST00000058665 714 ntBASIC12.77□□□□□ -0.37
Ccl1P10146 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccl1P10146 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccl1P10146 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccl1P10146 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.37
Ccl1P10146 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccl1P10146 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccl1P10146 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccl1P10146 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccl1P10146 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ccl1P10146 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccl1P10146 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ccl1P10146 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccl1P10146 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccl1P10146 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccl1P10146 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccl1P10146 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
Ccl1P10146 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccl1P10146 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Ccl1P10146 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccl1P10146 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ccl1P10146 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
Ccl1P10146 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ccl1P10146 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC12.76□□□□□ -0.37
Ccl1P10146 Gm44549-201ENSMUST00000208351 577 ntBASIC12.76□□□□□ -0.37
Ccl1P10146 Gm29340-201ENSMUST00000188763 3854 ntBASIC12.76□□□□□ -0.37
Ccl1P10146 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ccl1P10146 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC12.76□□□□□ -0.37
Ccl1P10146 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccl1P10146 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
Ccl1P10146 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ccl1P10146 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Ccl1P10146 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccl1P10146 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccl1P10146 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ccl1P10146 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC12.76□□□□□ -0.37
Ccl1P10146 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccl1P10146 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccl1P10146 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ccl1P10146 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccl1P10146 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC12.76□□□□□ -0.37
Ccl1P10146 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ccl1P10146 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ccl1P10146 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccl1P10146 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC12.75□□□□□ -0.37
Ccl1P10146 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC12.75□□□□□ -0.37
Ccl1P10146 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccl1P10146 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ccl1P10146 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccl1P10146 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccl1P10146 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccl1P10146 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccl1P10146 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC12.75□□□□□ -0.37
Ccl1P10146 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC12.75□□□□□ -0.37
Ccl1P10146 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccl1P10146 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC12.75□□□□□ -0.37
Ccl1P10146 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC12.75□□□□□ -0.37
Ccl1P10146 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Ccl1P10146 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC12.75□□□□□ -0.37
Ccl1P10146 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC12.75□□□□□ -0.37
Ccl1P10146 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccl1P10146 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC12.75□□□□□ -0.37
Ccl1P10146 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC12.75□□□□□ -0.37
Ccl1P10146 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC12.75□□□□□ -0.37
Ccl1P10146 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Ccl1P10146 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ccl1P10146 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
Ccl1P10146 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccl1P10146 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccl1P10146 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccl1P10146 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccl1P10146 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccl1P10146 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ccl1P10146 Gm10654-201ENSMUST00000098653 1633 ntBASIC12.75□□□□□ -0.37
Ccl1P10146 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccl1P10146 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccl1P10146 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ccl1P10146 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
Ccl1P10146 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Ccl1P10146 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccl1P10146 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
Ccl1P10146 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccl1P10146 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ccl1P10146 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccl1P10146 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccl1P10146 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccl1P10146 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccl1P10146 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccl1P10146 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccl1P10146 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccl1P10146 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Ccl1P10146 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC12.74□□□□□ -0.37
Ccl1P10146 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccl1P10146 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Ccl1P10146 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccl1P10146 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ccl1P10146 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC12.74□□□□□ -0.37
Ccl1P10146 Gm11927-201ENSMUST00000118472 759 ntBASIC12.74□□□□□ -0.37
Ccl1P10146 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms