Protein–RNA interactions for Protein: P08775

Polr2a, DNA-directed RNA polymerase II subunit RPB1, mousemouse

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr2aP08775 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Polr2aP08775 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Polr2aP08775 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Polr2aP08775 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC18.6■□□□□ 0.57
Polr2aP08775 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Polr2aP08775 Gm5177-201ENSMUST00000183092 997 ntBASIC18.6■□□□□ 0.57
Polr2aP08775 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Polr2aP08775 Gm45747-201ENSMUST00000212203 999 ntBASIC18.6■□□□□ 0.57
Polr2aP08775 AC093926.2-201ENSMUST00000214468 1228 ntBASIC18.6■□□□□ 0.57
Polr2aP08775 AC131709.1-201ENSMUST00000224731 1180 ntBASIC18.6■□□□□ 0.57
Polr2aP08775 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC18.6■□□□□ 0.57
Polr2aP08775 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Polr2aP08775 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Polr2aP08775 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Polr2aP08775 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Polr2aP08775 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Polr2aP08775 Gm9682-201ENSMUST00000197505 556 ntBASIC18.59■□□□□ 0.57
Polr2aP08775 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Polr2aP08775 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Polr2aP08775 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Polr2aP08775 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Polr2aP08775 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Polr2aP08775 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Polr2aP08775 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Polr2aP08775 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC18.59■□□□□ 0.57
Polr2aP08775 Gm23547-201ENSMUST00000158210 271 ntBASIC18.59■□□□□ 0.57
Polr2aP08775 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC18.59■□□□□ 0.57
Polr2aP08775 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Polr2aP08775 Mir6990-201ENSMUST00000183724 91 ntBASIC18.59■□□□□ 0.57
Polr2aP08775 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Polr2aP08775 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC18.59■□□□□ 0.57
Polr2aP08775 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Polr2aP08775 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Polr2aP08775 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Polr2aP08775 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Polr2aP08775 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Polr2aP08775 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Polr2aP08775 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC18.58■□□□□ 0.57
Polr2aP08775 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Polr2aP08775 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
Polr2aP08775 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Polr2aP08775 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Polr2aP08775 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Polr2aP08775 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Polr2aP08775 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Polr2aP08775 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Polr2aP08775 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Polr2aP08775 Gm37153-201ENSMUST00000193637 231 ntBASIC18.57■□□□□ 0.56
Polr2aP08775 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC18.57■□□□□ 0.56
Polr2aP08775 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Polr2aP08775 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Polr2aP08775 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Polr2aP08775 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Polr2aP08775 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Polr2aP08775 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Polr2aP08775 Gm15427-201ENSMUST00000117288 531 ntBASIC18.57■□□□□ 0.56
Polr2aP08775 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC18.57■□□□□ 0.56
Polr2aP08775 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Polr2aP08775 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Polr2aP08775 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Polr2aP08775 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Polr2aP08775 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Polr2aP08775 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Polr2aP08775 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Polr2aP08775 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.56■□□□□ 0.56
Polr2aP08775 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Polr2aP08775 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Polr2aP08775 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Polr2aP08775 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Polr2aP08775 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Polr2aP08775 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Polr2aP08775 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Polr2aP08775 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC18.56■□□□□ 0.56
Polr2aP08775 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Polr2aP08775 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Polr2aP08775 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC18.56■□□□□ 0.56
Polr2aP08775 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Polr2aP08775 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Polr2aP08775 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Polr2aP08775 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Polr2aP08775 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Polr2aP08775 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Polr2aP08775 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Polr2aP08775 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC18.55■□□□□ 0.56
Polr2aP08775 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Polr2aP08775 Gm11185-201ENSMUST00000117732 1007 ntBASIC18.55■□□□□ 0.56
Polr2aP08775 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC18.55■□□□□ 0.56
Polr2aP08775 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Polr2aP08775 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Polr2aP08775 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Polr2aP08775 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Polr2aP08775 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Polr2aP08775 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Polr2aP08775 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC18.55■□□□□ 0.56
Polr2aP08775 Gm43438-201ENSMUST00000198133 379 ntBASIC18.55■□□□□ 0.56
Polr2aP08775 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Polr2aP08775 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Polr2aP08775 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.54■□□□□ 0.56
Polr2aP08775 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Polr2aP08775 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms