Protein–RNA interactions for Protein: P06328

Ig heavy chain V region VH558 B4, mousemouse

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06328 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
P06328 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC12□□□□□ -0.49
P06328 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
P06328 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC12□□□□□ -0.49
P06328 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
P06328 Gm8520-201ENSMUST00000186517 868 ntBASIC12□□□□□ -0.49
P06328 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
P06328 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
P06328 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
P06328 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
P06328 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
P06328 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
P06328 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
P06328 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC12□□□□□ -0.49
P06328 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
P06328 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
P06328 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
P06328 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
P06328 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC12□□□□□ -0.49
P06328 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
P06328 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
P06328 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
P06328 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
P06328 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
P06328 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC11.99□□□□□ -0.49
P06328 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
P06328 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
P06328 Gm13186-201ENSMUST00000118031 316 ntBASIC11.99□□□□□ -0.49
P06328 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC11.99□□□□□ -0.49
P06328 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC11.99□□□□□ -0.49
P06328 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC11.99□□□□□ -0.49
P06328 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
P06328 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
P06328 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
P06328 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
P06328 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
P06328 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
P06328 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
P06328 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
P06328 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
P06328 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
P06328 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
P06328 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
P06328 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
P06328 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
P06328 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
P06328 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
P06328 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
P06328 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
P06328 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
P06328 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
P06328 AC154231.1-201ENSMUST00000220564 2175 ntBASIC11.98□□□□□ -0.49
P06328 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
P06328 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC11.98□□□□□ -0.49
P06328 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
P06328 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC11.98□□□□□ -0.49
P06328 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC11.98□□□□□ -0.49
P06328 Gm27463-201ENSMUST00000183569 57 ntBASIC11.98□□□□□ -0.49
P06328 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC11.98□□□□□ -0.49
P06328 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
P06328 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
P06328 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
P06328 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
P06328 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
P06328 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
P06328 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
P06328 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
P06328 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
P06328 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
P06328 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC11.98□□□□□ -0.49
P06328 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
P06328 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
P06328 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
P06328 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
P06328 Phf7-203ENSMUST00000226565 1971 ntBASIC11.98□□□□□ -0.49
P06328 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
P06328 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
P06328 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
P06328 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
P06328 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
P06328 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
P06328 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
P06328 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
P06328 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
P06328 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
P06328 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
P06328 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
P06328 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
P06328 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
P06328 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
P06328 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
P06328 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
P06328 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
P06328 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
P06328 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC11.97□□□□□ -0.49
P06328 Gm43353-201ENSMUST00000199224 1295 ntBASIC11.97□□□□□ -0.49
P06328 Gm21814-202ENSMUST00000203277 873 ntBASIC11.97□□□□□ -0.49
P06328 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
P06328 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
P06328 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms