Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Hoxa3P02831 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hoxa3P02831 Hivep3-201ENSMUST00000084306 2973 ntBASIC13.74□□□□□ -0.21
Hoxa3P02831 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC13.74□□□□□ -0.21
Hoxa3P02831 Gm37519-201ENSMUST00000191687 2210 ntBASIC13.74□□□□□ -0.21
Hoxa3P02831 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hoxa3P02831 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hoxa3P02831 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Hoxa3P02831 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hoxa3P02831 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hoxa3P02831 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hoxa3P02831 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Hoxa3P02831 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hoxa3P02831 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hoxa3P02831 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Hoxa3P02831 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC13.73□□□□□ -0.21
Hoxa3P02831 Mir3081-201ENSMUST00000175305 84 ntBASIC13.73□□□□□ -0.21
Hoxa3P02831 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC13.73□□□□□ -0.21
Hoxa3P02831 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Hoxa3P02831 Gm44450-201ENSMUST00000199528 114 ntBASIC13.73□□□□□ -0.21
Hoxa3P02831 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC13.73□□□□□ -0.21
Hoxa3P02831 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hoxa3P02831 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Hoxa3P02831 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC13.73□□□□□ -0.21
Hoxa3P02831 Gm37166-201ENSMUST00000195473 2474 ntBASIC13.73□□□□□ -0.21
Hoxa3P02831 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Hoxa3P02831 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hoxa3P02831 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hoxa3P02831 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Hoxa3P02831 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hoxa3P02831 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hoxa3P02831 AL590614.2-201ENSMUST00000225374 1937 ntBASIC13.72□□□□□ -0.21
Hoxa3P02831 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hoxa3P02831 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Hoxa3P02831 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hoxa3P02831 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hoxa3P02831 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC13.72□□□□□ -0.21
Hoxa3P02831 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hoxa3P02831 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Hoxa3P02831 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hoxa3P02831 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Hoxa3P02831 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Hoxa3P02831 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hoxa3P02831 Gm18115-201ENSMUST00000221209 621 ntBASIC13.72□□□□□ -0.21
Hoxa3P02831 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hoxa3P02831 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hoxa3P02831 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hoxa3P02831 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Hoxa3P02831 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hoxa3P02831 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Hoxa3P02831 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hoxa3P02831 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hoxa3P02831 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC13.72□□□□□ -0.21
Hoxa3P02831 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hoxa3P02831 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hoxa3P02831 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Hoxa3P02831 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC13.71□□□□□ -0.21
Hoxa3P02831 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Hoxa3P02831 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hoxa3P02831 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hoxa3P02831 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Hoxa3P02831 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC13.71□□□□□ -0.21
Hoxa3P02831 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hoxa3P02831 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Hoxa3P02831 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hoxa3P02831 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hoxa3P02831 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Hoxa3P02831 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hoxa3P02831 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Hoxa3P02831 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Hoxa3P02831 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Hoxa3P02831 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Hoxa3P02831 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Hoxa3P02831 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Hoxa3P02831 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hoxa3P02831 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hoxa3P02831 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hoxa3P02831 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC13.7□□□□□ -0.22
Hoxa3P02831 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hoxa3P02831 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hoxa3P02831 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hoxa3P02831 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hoxa3P02831 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hoxa3P02831 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC13.7□□□□□ -0.22
Hoxa3P02831 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Hoxa3P02831 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC13.7□□□□□ -0.22
Hoxa3P02831 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC13.7□□□□□ -0.22
Hoxa3P02831 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
Hoxa3P02831 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hoxa3P02831 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hoxa3P02831 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Hoxa3P02831 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hoxa3P02831 AC154231.1-201ENSMUST00000220564 2175 ntBASIC13.69□□□□□ -0.22
Hoxa3P02831 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hoxa3P02831 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hoxa3P02831 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hoxa3P02831 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hoxa3P02831 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Hoxa3P02831 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Hoxa3P02831 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms