Protein–RNA interactions for Protein: P02301

H3f3c, Histone H3.3C, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3cP02301 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
H3f3cP02301 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
H3f3cP02301 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
H3f3cP02301 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
H3f3cP02301 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
H3f3cP02301 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
H3f3cP02301 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
H3f3cP02301 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
H3f3cP02301 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
H3f3cP02301 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC14.06□□□□□ -0.16
H3f3cP02301 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
H3f3cP02301 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC14.06□□□□□ -0.16
H3f3cP02301 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
H3f3cP02301 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
H3f3cP02301 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
H3f3cP02301 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
H3f3cP02301 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
H3f3cP02301 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
H3f3cP02301 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
H3f3cP02301 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
H3f3cP02301 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
H3f3cP02301 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
H3f3cP02301 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC14.06□□□□□ -0.16
H3f3cP02301 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
H3f3cP02301 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
H3f3cP02301 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
H3f3cP02301 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
H3f3cP02301 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
H3f3cP02301 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
H3f3cP02301 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
H3f3cP02301 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
H3f3cP02301 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
H3f3cP02301 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
H3f3cP02301 Gm11336-201ENSMUST00000118168 334 ntBASIC14.05□□□□□ -0.16
H3f3cP02301 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
H3f3cP02301 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
H3f3cP02301 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
H3f3cP02301 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC14.05□□□□□ -0.16
H3f3cP02301 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
H3f3cP02301 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
H3f3cP02301 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
H3f3cP02301 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC14.05□□□□□ -0.16
H3f3cP02301 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
H3f3cP02301 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
H3f3cP02301 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC14.05□□□□□ -0.16
H3f3cP02301 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
H3f3cP02301 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC14.04□□□□□ -0.16
H3f3cP02301 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
H3f3cP02301 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
H3f3cP02301 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
H3f3cP02301 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
H3f3cP02301 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
H3f3cP02301 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
H3f3cP02301 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
H3f3cP02301 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
H3f3cP02301 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
H3f3cP02301 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
H3f3cP02301 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
H3f3cP02301 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
H3f3cP02301 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC14.04□□□□□ -0.16
H3f3cP02301 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
H3f3cP02301 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
H3f3cP02301 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
H3f3cP02301 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
H3f3cP02301 Gm9013-201ENSMUST00000132939 882 ntBASIC14.04□□□□□ -0.16
H3f3cP02301 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC14.04□□□□□ -0.16
H3f3cP02301 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
H3f3cP02301 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
H3f3cP02301 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
H3f3cP02301 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
H3f3cP02301 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
H3f3cP02301 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC14.04□□□□□ -0.16
H3f3cP02301 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
H3f3cP02301 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
H3f3cP02301 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC14.04□□□□□ -0.16
H3f3cP02301 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
H3f3cP02301 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
H3f3cP02301 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
H3f3cP02301 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
H3f3cP02301 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
H3f3cP02301 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC14.04□□□□□ -0.16
H3f3cP02301 Gm45203-201ENSMUST00000206384 1831 ntBASIC14.04□□□□□ -0.16
H3f3cP02301 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
H3f3cP02301 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
H3f3cP02301 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
H3f3cP02301 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
H3f3cP02301 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC14.03□□□□□ -0.16
H3f3cP02301 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
H3f3cP02301 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
H3f3cP02301 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
H3f3cP02301 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
H3f3cP02301 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC14.03□□□□□ -0.16
H3f3cP02301 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC14.03□□□□□ -0.16
H3f3cP02301 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC14.03□□□□□ -0.16
H3f3cP02301 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
H3f3cP02301 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC14.03□□□□□ -0.16
H3f3cP02301 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
H3f3cP02301 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC14.03□□□□□ -0.16
H3f3cP02301 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
H3f3cP02301 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 66 ms