Protein–RNA interactions for Protein: O88609

Lmx1b, LIM homeobox transcription factor 1-beta, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmx1bO88609 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Lmx1bO88609 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lmx1bO88609 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Lmx1bO88609 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lmx1bO88609 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lmx1bO88609 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Lmx1bO88609 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lmx1bO88609 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC14.81□□□□□ -0.04
Lmx1bO88609 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lmx1bO88609 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lmx1bO88609 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Lmx1bO88609 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC14.81□□□□□ -0.04
Lmx1bO88609 Gm29707-201ENSMUST00000196325 491 ntBASIC14.81□□□□□ -0.04
Lmx1bO88609 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC14.81□□□□□ -0.04
Lmx1bO88609 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lmx1bO88609 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lmx1bO88609 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lmx1bO88609 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Lmx1bO88609 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Lmx1bO88609 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Lmx1bO88609 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lmx1bO88609 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lmx1bO88609 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
Lmx1bO88609 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC14.81□□□□□ -0.04
Lmx1bO88609 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lmx1bO88609 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Lmx1bO88609 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lmx1bO88609 Gm36858-201ENSMUST00000194501 2391 ntBASIC14.81□□□□□ -0.04
Lmx1bO88609 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lmx1bO88609 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC14.8□□□□□ -0.04
Lmx1bO88609 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
Lmx1bO88609 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lmx1bO88609 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lmx1bO88609 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lmx1bO88609 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lmx1bO88609 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lmx1bO88609 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lmx1bO88609 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lmx1bO88609 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Lmx1bO88609 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lmx1bO88609 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC14.8□□□□□ -0.04
Lmx1bO88609 AC124569.2-201ENSMUST00000225998 818 ntBASIC14.8□□□□□ -0.04
Lmx1bO88609 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lmx1bO88609 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lmx1bO88609 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lmx1bO88609 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lmx1bO88609 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lmx1bO88609 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC14.8□□□□□ -0.04
Lmx1bO88609 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lmx1bO88609 Zfp264-201ENSMUST00000208656 1563 ntBASIC14.8□□□□□ -0.04
Lmx1bO88609 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC14.8□□□□□ -0.04
Lmx1bO88609 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lmx1bO88609 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Lmx1bO88609 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Lmx1bO88609 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Lmx1bO88609 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lmx1bO88609 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lmx1bO88609 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Lmx1bO88609 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC14.8□□□□□ -0.04
Lmx1bO88609 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lmx1bO88609 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lmx1bO88609 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Lmx1bO88609 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lmx1bO88609 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Lmx1bO88609 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lmx1bO88609 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
Lmx1bO88609 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC14.79□□□□□ -0.04
Lmx1bO88609 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lmx1bO88609 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lmx1bO88609 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lmx1bO88609 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lmx1bO88609 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC14.79□□□□□ -0.04
Lmx1bO88609 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Lmx1bO88609 AC125350.1-201ENSMUST00000225115 903 ntBASIC14.79□□□□□ -0.04
Lmx1bO88609 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lmx1bO88609 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lmx1bO88609 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lmx1bO88609 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lmx1bO88609 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lmx1bO88609 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lmx1bO88609 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Lmx1bO88609 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Lmx1bO88609 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Lmx1bO88609 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Lmx1bO88609 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lmx1bO88609 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Lmx1bO88609 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Lmx1bO88609 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Lmx1bO88609 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lmx1bO88609 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lmx1bO88609 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lmx1bO88609 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lmx1bO88609 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lmx1bO88609 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lmx1bO88609 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lmx1bO88609 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC14.78□□□□□ -0.04
Lmx1bO88609 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Lmx1bO88609 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC14.78□□□□□ -0.04
Lmx1bO88609 AC133598.3-202ENSMUST00000224219 531 ntBASIC14.78□□□□□ -0.04
Lmx1bO88609 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms