Protein–RNA interactions for Protein: O55042

Snca, Alpha-synuclein, mousemouse

Known RBP Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SncaO55042 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SncaO55042 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SncaO55042 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC13.58□□□□□ -0.24
SncaO55042 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
SncaO55042 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SncaO55042 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
SncaO55042 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC13.57□□□□□ -0.24
SncaO55042 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SncaO55042 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SncaO55042 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC13.57□□□□□ -0.24
SncaO55042 Il3ra-202ENSMUST00000223589 738 ntBASIC13.57□□□□□ -0.24
SncaO55042 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SncaO55042 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
SncaO55042 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC13.57□□□□□ -0.24
SncaO55042 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC13.57□□□□□ -0.24
SncaO55042 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
SncaO55042 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SncaO55042 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SncaO55042 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SncaO55042 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SncaO55042 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
SncaO55042 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SncaO55042 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SncaO55042 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC13.56□□□□□ -0.24
SncaO55042 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SncaO55042 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
SncaO55042 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SncaO55042 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SncaO55042 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SncaO55042 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
SncaO55042 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SncaO55042 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SncaO55042 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
SncaO55042 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SncaO55042 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SncaO55042 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
SncaO55042 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
SncaO55042 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
SncaO55042 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SncaO55042 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SncaO55042 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SncaO55042 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
SncaO55042 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
SncaO55042 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
SncaO55042 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
SncaO55042 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SncaO55042 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
SncaO55042 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SncaO55042 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SncaO55042 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SncaO55042 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SncaO55042 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SncaO55042 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SncaO55042 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SncaO55042 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SncaO55042 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
SncaO55042 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SncaO55042 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
SncaO55042 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC13.55□□□□□ -0.24
SncaO55042 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC13.55□□□□□ -0.24
SncaO55042 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SncaO55042 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SncaO55042 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
SncaO55042 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC13.55□□□□□ -0.24
SncaO55042 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SncaO55042 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SncaO55042 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SncaO55042 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
SncaO55042 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
SncaO55042 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SncaO55042 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SncaO55042 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SncaO55042 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SncaO55042 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SncaO55042 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC13.54□□□□□ -0.24
SncaO55042 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
SncaO55042 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SncaO55042 Gm37812-201ENSMUST00000195216 2475 ntBASIC13.54□□□□□ -0.24
SncaO55042 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SncaO55042 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
SncaO55042 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SncaO55042 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SncaO55042 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
SncaO55042 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
SncaO55042 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
SncaO55042 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC13.54□□□□□ -0.24
SncaO55042 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC13.54□□□□□ -0.24
SncaO55042 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC13.54□□□□□ -0.24
SncaO55042 Gm20760-201ENSMUST00000179197 648 ntBASIC13.54□□□□□ -0.24
SncaO55042 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
SncaO55042 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SncaO55042 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
SncaO55042 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
SncaO55042 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC13.54□□□□□ -0.24
SncaO55042 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SncaO55042 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
SncaO55042 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SncaO55042 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SncaO55042 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
SncaO55042 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms