Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rnf13O54965 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rnf13O54965 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rnf13O54965 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rnf13O54965 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Rnf13O54965 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC14.88□□□□□ -0.03
Rnf13O54965 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rnf13O54965 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC14.87□□□□□ -0.03
Rnf13O54965 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rnf13O54965 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rnf13O54965 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Rnf13O54965 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rnf13O54965 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Rnf13O54965 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Rnf13O54965 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Rnf13O54965 AC133083.1-201ENSMUST00000221736 2209 ntBASIC14.87□□□□□ -0.03
Rnf13O54965 Ptprs-211ENSMUST00000223859 5588 ntBASIC14.87□□□□□ -0.03
Rnf13O54965 Gm12085-201ENSMUST00000119263 940 ntBASIC14.87□□□□□ -0.03
Rnf13O54965 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Rnf13O54965 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Rnf13O54965 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC14.87□□□□□ -0.03
Rnf13O54965 AC120002.2-201ENSMUST00000220205 773 ntBASIC14.87□□□□□ -0.03
Rnf13O54965 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rnf13O54965 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rnf13O54965 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rnf13O54965 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Rnf13O54965 Gm19430-201ENSMUST00000193847 2137 ntBASIC14.87□□□□□ -0.03
Rnf13O54965 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rnf13O54965 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Rnf13O54965 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC14.87□□□□□ -0.03
Rnf13O54965 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Rnf13O54965 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rnf13O54965 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rnf13O54965 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rnf13O54965 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rnf13O54965 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rnf13O54965 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Rnf13O54965 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Rnf13O54965 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC14.86□□□□□ -0.03
Rnf13O54965 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Rnf13O54965 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rnf13O54965 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rnf13O54965 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rnf13O54965 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Rnf13O54965 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rnf13O54965 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Rnf13O54965 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rnf13O54965 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rnf13O54965 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rnf13O54965 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rnf13O54965 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rnf13O54965 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC14.86□□□□□ -0.03
Rnf13O54965 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Rnf13O54965 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rnf13O54965 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC14.86□□□□□ -0.03
Rnf13O54965 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Rnf13O54965 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Rnf13O54965 Il3ra-202ENSMUST00000223589 738 ntBASIC14.86□□□□□ -0.03
Rnf13O54965 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rnf13O54965 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rnf13O54965 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rnf13O54965 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rnf13O54965 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rnf13O54965 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rnf13O54965 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rnf13O54965 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Rnf13O54965 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rnf13O54965 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rnf13O54965 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rnf13O54965 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rnf13O54965 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Rnf13O54965 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Rnf13O54965 Gm18958-201ENSMUST00000174258 762 ntBASIC14.85□□□□□ -0.03
Rnf13O54965 Gm10698-201ENSMUST00000182663 604 ntBASIC14.85□□□□□ -0.03
Rnf13O54965 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC14.85□□□□□ -0.03
Rnf13O54965 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rnf13O54965 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rnf13O54965 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rnf13O54965 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rnf13O54965 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
Rnf13O54965 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rnf13O54965 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC14.85□□□□□ -0.03
Rnf13O54965 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rnf13O54965 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC14.85□□□□□ -0.03
Rnf13O54965 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Rnf13O54965 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rnf13O54965 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rnf13O54965 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
Rnf13O54965 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC14.85□□□□□ -0.03
Rnf13O54965 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Rnf13O54965 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Rnf13O54965 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Rnf13O54965 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rnf13O54965 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rnf13O54965 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rnf13O54965 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rnf13O54965 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Rnf13O54965 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Rnf13O54965 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Rnf13O54965 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC14.84□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms