Protein–RNA interactions for Protein: O54962

Banf1, Barrier-to-autointegration factor, mousemouse

Predictions only

Length 89 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Banf1O54962 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC16.67■□□□□ 0.26
Banf1O54962 Gm27011-201ENSMUST00000182352 972 ntBASIC16.67■□□□□ 0.26
Banf1O54962 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Banf1O54962 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Banf1O54962 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Banf1O54962 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Banf1O54962 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Banf1O54962 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Banf1O54962 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Banf1O54962 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Banf1O54962 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Banf1O54962 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Banf1O54962 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC16.66■□□□□ 0.26
Banf1O54962 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Banf1O54962 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Banf1O54962 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Banf1O54962 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Banf1O54962 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Banf1O54962 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Banf1O54962 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Banf1O54962 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
Banf1O54962 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Banf1O54962 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Banf1O54962 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Banf1O54962 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC16.66■□□□□ 0.26
Banf1O54962 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Banf1O54962 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC16.66■□□□□ 0.26
Banf1O54962 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Banf1O54962 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
Banf1O54962 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Banf1O54962 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Banf1O54962 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Banf1O54962 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Banf1O54962 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Banf1O54962 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Banf1O54962 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Banf1O54962 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Banf1O54962 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Banf1O54962 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Banf1O54962 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC16.66■□□□□ 0.26
Banf1O54962 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Banf1O54962 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC16.65■□□□□ 0.26
Banf1O54962 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Banf1O54962 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Banf1O54962 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Banf1O54962 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC16.65■□□□□ 0.26
Banf1O54962 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Banf1O54962 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Banf1O54962 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC16.65■□□□□ 0.26
Banf1O54962 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Banf1O54962 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
Banf1O54962 Gm7370-201ENSMUST00000219471 767 ntBASIC16.65■□□□□ 0.26
Banf1O54962 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Banf1O54962 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Banf1O54962 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Banf1O54962 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Banf1O54962 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Banf1O54962 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Banf1O54962 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC16.65■□□□□ 0.26
Banf1O54962 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Banf1O54962 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Banf1O54962 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Banf1O54962 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Banf1O54962 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Banf1O54962 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Banf1O54962 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC16.65■□□□□ 0.26
Banf1O54962 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Banf1O54962 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Banf1O54962 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Banf1O54962 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
Banf1O54962 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Banf1O54962 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Banf1O54962 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Banf1O54962 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Banf1O54962 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Banf1O54962 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Banf1O54962 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC16.64■□□□□ 0.25
Banf1O54962 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Banf1O54962 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC16.64■□□□□ 0.25
Banf1O54962 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Banf1O54962 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC16.64■□□□□ 0.25
Banf1O54962 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Banf1O54962 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Banf1O54962 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Banf1O54962 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Banf1O54962 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Banf1O54962 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Banf1O54962 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Banf1O54962 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Banf1O54962 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Banf1O54962 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
Banf1O54962 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC16.63■□□□□ 0.25
Banf1O54962 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Banf1O54962 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC16.63■□□□□ 0.25
Banf1O54962 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC16.63■□□□□ 0.25
Banf1O54962 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC16.63■□□□□ 0.25
Banf1O54962 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC16.63■□□□□ 0.25
Banf1O54962 AC135963.1-201ENSMUST00000211640 717 ntBASIC16.63■□□□□ 0.25
Banf1O54962 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Banf1O54962 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms