Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nr1i3O35627 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nr1i3O35627 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nr1i3O35627 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nr1i3O35627 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC17.61■□□□□ 0.41
Nr1i3O35627 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Nr1i3O35627 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nr1i3O35627 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nr1i3O35627 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nr1i3O35627 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC17.61■□□□□ 0.41
Nr1i3O35627 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nr1i3O35627 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC17.6■□□□□ 0.41
Nr1i3O35627 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC17.6■□□□□ 0.41
Nr1i3O35627 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nr1i3O35627 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC17.6■□□□□ 0.41
Nr1i3O35627 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nr1i3O35627 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nr1i3O35627 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nr1i3O35627 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nr1i3O35627 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nr1i3O35627 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Nr1i3O35627 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC17.6■□□□□ 0.41
Nr1i3O35627 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Nr1i3O35627 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nr1i3O35627 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nr1i3O35627 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nr1i3O35627 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Nr1i3O35627 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nr1i3O35627 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nr1i3O35627 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nr1i3O35627 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC17.59■□□□□ 0.41
Nr1i3O35627 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nr1i3O35627 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nr1i3O35627 Gm13559-201ENSMUST00000120476 863 ntBASIC17.59■□□□□ 0.41
Nr1i3O35627 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC17.59■□□□□ 0.41
Nr1i3O35627 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC17.59■□□□□ 0.41
Nr1i3O35627 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC17.59■□□□□ 0.41
Nr1i3O35627 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC17.59■□□□□ 0.41
Nr1i3O35627 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nr1i3O35627 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nr1i3O35627 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nr1i3O35627 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nr1i3O35627 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nr1i3O35627 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nr1i3O35627 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Nr1i3O35627 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nr1i3O35627 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nr1i3O35627 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Nr1i3O35627 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Nr1i3O35627 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Nr1i3O35627 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Nr1i3O35627 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Nr1i3O35627 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Nr1i3O35627 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Nr1i3O35627 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Nr1i3O35627 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Nr1i3O35627 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Nr1i3O35627 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Nr1i3O35627 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nr1i3O35627 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nr1i3O35627 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nr1i3O35627 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nr1i3O35627 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC17.58■□□□□ 0.4
Nr1i3O35627 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nr1i3O35627 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nr1i3O35627 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nr1i3O35627 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nr1i3O35627 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC17.58■□□□□ 0.4
Nr1i3O35627 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nr1i3O35627 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nr1i3O35627 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nr1i3O35627 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nr1i3O35627 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC17.58■□□□□ 0.4
Nr1i3O35627 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nr1i3O35627 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Nr1i3O35627 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nr1i3O35627 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nr1i3O35627 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nr1i3O35627 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Nr1i3O35627 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Nr1i3O35627 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Nr1i3O35627 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nr1i3O35627 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nr1i3O35627 Gm26039-201ENSMUST00000158152 144 ntBASIC17.57■□□□□ 0.4
Nr1i3O35627 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Nr1i3O35627 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
Nr1i3O35627 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nr1i3O35627 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Nr1i3O35627 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nr1i3O35627 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC17.56■□□□□ 0.4
Nr1i3O35627 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nr1i3O35627 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC17.56■□□□□ 0.4
Nr1i3O35627 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nr1i3O35627 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Nr1i3O35627 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC17.56■□□□□ 0.4
Nr1i3O35627 AL672049.1-201ENSMUST00000197943 91 ntBASIC17.56■□□□□ 0.4
Nr1i3O35627 AC159205.6-201ENSMUST00000224935 887 ntBASIC17.56■□□□□ 0.4
Nr1i3O35627 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nr1i3O35627 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nr1i3O35627 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms