Protein–RNA interactions for Protein: O09106

Hdac1, Histone deacetylase 1, mousemouse

Known RBP Predictions only

Length 482 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac1O09106 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Hdac1O09106 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Hdac1O09106 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC19.5■□□□□ 0.71
Hdac1O09106 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Hdac1O09106 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC19.5■□□□□ 0.71
Hdac1O09106 Gm20760-201ENSMUST00000179197 648 ntBASIC19.5■□□□□ 0.71
Hdac1O09106 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Hdac1O09106 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC19.5■□□□□ 0.71
Hdac1O09106 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Hdac1O09106 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Hdac1O09106 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Hdac1O09106 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Hdac1O09106 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC19.5■□□□□ 0.71
Hdac1O09106 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC19.5■□□□□ 0.71
Hdac1O09106 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
Hdac1O09106 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Hdac1O09106 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC19.5■□□□□ 0.71
Hdac1O09106 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Hdac1O09106 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Hdac1O09106 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Hdac1O09106 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Hdac1O09106 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Hdac1O09106 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Hdac1O09106 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Hdac1O09106 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Hdac1O09106 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Hdac1O09106 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Hdac1O09106 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Hdac1O09106 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Hdac1O09106 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC19.49■□□□□ 0.71
Hdac1O09106 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC19.49■□□□□ 0.71
Hdac1O09106 Gm18421-201ENSMUST00000204122 625 ntBASIC19.49■□□□□ 0.71
Hdac1O09106 Arhgef4-208ENSMUST00000211073 171 ntBASIC19.49■□□□□ 0.71
Hdac1O09106 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Hdac1O09106 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Hdac1O09106 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Hdac1O09106 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Hdac1O09106 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Hdac1O09106 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Hdac1O09106 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Hdac1O09106 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Hdac1O09106 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Hdac1O09106 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Hdac1O09106 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Hdac1O09106 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Hdac1O09106 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Hdac1O09106 Asic1-205ENSMUST00000228185 1818 ntBASIC19.48■□□□□ 0.71
Hdac1O09106 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Hdac1O09106 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Hdac1O09106 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Hdac1O09106 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Hdac1O09106 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Hdac1O09106 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Hdac1O09106 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Hdac1O09106 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC19.48■□□□□ 0.71
Hdac1O09106 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Hdac1O09106 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
Hdac1O09106 Gm7370-201ENSMUST00000219471 767 ntBASIC19.48■□□□□ 0.71
Hdac1O09106 CT025689.6-201ENSMUST00000224991 1104 ntBASIC19.48■□□□□ 0.71
Hdac1O09106 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Hdac1O09106 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Hdac1O09106 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Hdac1O09106 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Hdac1O09106 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Hdac1O09106 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Hdac1O09106 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Hdac1O09106 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Hdac1O09106 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Hdac1O09106 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Hdac1O09106 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC19.47■□□□□ 0.71
Hdac1O09106 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Hdac1O09106 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC19.47■□□□□ 0.71
Hdac1O09106 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Hdac1O09106 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Hdac1O09106 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Hdac1O09106 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Hdac1O09106 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC19.47■□□□□ 0.71
Hdac1O09106 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Hdac1O09106 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Hdac1O09106 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Hdac1O09106 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Hdac1O09106 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC19.47■□□□□ 0.71
Hdac1O09106 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hdac1O09106 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hdac1O09106 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Hdac1O09106 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hdac1O09106 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Hdac1O09106 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hdac1O09106 App-207ENSMUST00000227737 2827 ntBASIC19.46■□□□□ 0.71
Hdac1O09106 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Hdac1O09106 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hdac1O09106 Gm5421-201ENSMUST00000181698 2354 ntBASIC19.46■□□□□ 0.71
Hdac1O09106 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Hdac1O09106 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC19.46■□□□□ 0.71
Hdac1O09106 Gm13168-201ENSMUST00000121771 632 ntBASIC19.46■□□□□ 0.71
Hdac1O09106 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC19.46■□□□□ 0.71
Hdac1O09106 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hdac1O09106 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Hdac1O09106 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hdac1O09106 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms