Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ebf3O08791 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ebf3O08791 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
Ebf3O08791 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ebf3O08791 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC16.97■□□□□ 0.31
Ebf3O08791 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC16.97■□□□□ 0.31
Ebf3O08791 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC16.97■□□□□ 0.31
Ebf3O08791 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Ebf3O08791 AC159301.1-201ENSMUST00000225130 1182 ntBASIC16.97■□□□□ 0.31
Ebf3O08791 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC16.97■□□□□ 0.31
Ebf3O08791 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ebf3O08791 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ebf3O08791 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
Ebf3O08791 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ebf3O08791 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ebf3O08791 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ebf3O08791 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Ebf3O08791 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ebf3O08791 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ebf3O08791 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Ebf3O08791 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ebf3O08791 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Ebf3O08791 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ebf3O08791 Gm15372-201ENSMUST00000120729 834 ntBASIC16.96■□□□□ 0.31
Ebf3O08791 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Ebf3O08791 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Ebf3O08791 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC16.96■□□□□ 0.31
Ebf3O08791 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Ebf3O08791 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ebf3O08791 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC16.96■□□□□ 0.31
Ebf3O08791 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Ebf3O08791 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ebf3O08791 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ebf3O08791 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ebf3O08791 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
Ebf3O08791 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ebf3O08791 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ebf3O08791 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ebf3O08791 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Ebf3O08791 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
Ebf3O08791 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Ebf3O08791 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Ebf3O08791 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ebf3O08791 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ebf3O08791 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ebf3O08791 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ebf3O08791 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ebf3O08791 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Ebf3O08791 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ebf3O08791 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC16.95■□□□□ 0.3
Ebf3O08791 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ebf3O08791 AC108846.1-201ENSMUST00000214531 513 ntBASIC16.95■□□□□ 0.3
Ebf3O08791 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ebf3O08791 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ebf3O08791 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC16.95■□□□□ 0.3
Ebf3O08791 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ebf3O08791 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ebf3O08791 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ebf3O08791 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ebf3O08791 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ebf3O08791 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ebf3O08791 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ebf3O08791 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ebf3O08791 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC16.94■□□□□ 0.3
Ebf3O08791 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ebf3O08791 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ebf3O08791 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ebf3O08791 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ebf3O08791 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
Ebf3O08791 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC16.94■□□□□ 0.3
Ebf3O08791 Gm12644-201ENSMUST00000119935 606 ntBASIC16.94■□□□□ 0.3
Ebf3O08791 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC16.94■□□□□ 0.3
Ebf3O08791 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ebf3O08791 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC16.94■□□□□ 0.3
Ebf3O08791 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ebf3O08791 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC16.94■□□□□ 0.3
Ebf3O08791 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ebf3O08791 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ebf3O08791 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ebf3O08791 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ebf3O08791 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ebf3O08791 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ebf3O08791 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ebf3O08791 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ebf3O08791 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ebf3O08791 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ebf3O08791 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ebf3O08791 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC16.93■□□□□ 0.3
Ebf3O08791 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ebf3O08791 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ebf3O08791 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ebf3O08791 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ebf3O08791 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC16.93■□□□□ 0.3
Ebf3O08791 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ebf3O08791 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ebf3O08791 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ebf3O08791 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ebf3O08791 AC153794.1-201ENSMUST00000169148 126 ntBASIC16.93■□□□□ 0.3
Ebf3O08791 AW822252-206ENSMUST00000208904 237 ntBASIC16.93■□□□□ 0.3
Ebf3O08791 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms