Protein–RNA interactions for Protein: O08602

Raet1a, Retinoic acid early-inducible protein 1-alpha, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1aO08602 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Raet1aO08602 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Raet1aO08602 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Raet1aO08602 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Raet1aO08602 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Raet1aO08602 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC14.53□□□□□ -0.08
Raet1aO08602 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Raet1aO08602 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Raet1aO08602 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Raet1aO08602 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Raet1aO08602 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Raet1aO08602 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Raet1aO08602 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Raet1aO08602 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Raet1aO08602 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Raet1aO08602 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Raet1aO08602 Slc35b2-202ENSMUST00000223987 1766 ntBASIC14.52□□□□□ -0.08
Raet1aO08602 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC14.52□□□□□ -0.08
Raet1aO08602 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Raet1aO08602 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
Raet1aO08602 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Raet1aO08602 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Raet1aO08602 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Raet1aO08602 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Raet1aO08602 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Raet1aO08602 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
Raet1aO08602 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Raet1aO08602 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC14.52□□□□□ -0.09
Raet1aO08602 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Raet1aO08602 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC14.52□□□□□ -0.09
Raet1aO08602 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC14.52□□□□□ -0.09
Raet1aO08602 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC14.52□□□□□ -0.09
Raet1aO08602 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Raet1aO08602 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Raet1aO08602 Gm18032-201ENSMUST00000222541 538 ntBASIC14.52□□□□□ -0.09
Raet1aO08602 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Raet1aO08602 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Raet1aO08602 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.09
Raet1aO08602 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Raet1aO08602 Gm5421-201ENSMUST00000181698 2354 ntBASIC14.52□□□□□ -0.09
Raet1aO08602 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC14.52□□□□□ -0.09
Raet1aO08602 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Raet1aO08602 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Raet1aO08602 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Raet1aO08602 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.09
Raet1aO08602 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC14.51□□□□□ -0.09
Raet1aO08602 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Raet1aO08602 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Raet1aO08602 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Raet1aO08602 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Raet1aO08602 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Raet1aO08602 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Raet1aO08602 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Raet1aO08602 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Raet1aO08602 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Raet1aO08602 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Raet1aO08602 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Raet1aO08602 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Raet1aO08602 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Raet1aO08602 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Raet1aO08602 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Raet1aO08602 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Raet1aO08602 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC14.51□□□□□ -0.09
Raet1aO08602 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Raet1aO08602 AC159205.3-201ENSMUST00000224614 874 ntBASIC14.51□□□□□ -0.09
Raet1aO08602 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Raet1aO08602 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Raet1aO08602 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Raet1aO08602 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
Raet1aO08602 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Raet1aO08602 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC14.51□□□□□ -0.09
Raet1aO08602 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Raet1aO08602 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Raet1aO08602 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Raet1aO08602 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Raet1aO08602 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Raet1aO08602 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Raet1aO08602 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Raet1aO08602 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Raet1aO08602 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Raet1aO08602 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Raet1aO08602 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Raet1aO08602 AC115863.1-201ENSMUST00000214815 1813 ntBASIC14.5□□□□□ -0.09
Raet1aO08602 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Raet1aO08602 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Raet1aO08602 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Raet1aO08602 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC14.5□□□□□ -0.09
Raet1aO08602 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Raet1aO08602 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Raet1aO08602 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
Raet1aO08602 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Raet1aO08602 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Raet1aO08602 Gm37722-201ENSMUST00000193757 208 ntBASIC14.5□□□□□ -0.09
Raet1aO08602 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Raet1aO08602 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Raet1aO08602 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Raet1aO08602 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Raet1aO08602 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Raet1aO08602 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Raet1aO08602 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms