Protein–RNA interactions for Protein: J3QK78

Gm3139, Predicted gene 3139, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3139J3QK78 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm3139J3QK78 Gm9889-202ENSMUST00000206983 1577 ntBASIC16.3■□□□□ 0.2
Gm3139J3QK78 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Gm3139J3QK78 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Gm3139J3QK78 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm3139J3QK78 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm3139J3QK78 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm3139J3QK78 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC16.3■□□□□ 0.2
Gm3139J3QK78 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC16.3■□□□□ 0.2
Gm3139J3QK78 Gm15372-201ENSMUST00000120729 834 ntBASIC16.3■□□□□ 0.2
Gm3139J3QK78 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm3139J3QK78 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Gm3139J3QK78 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Gm3139J3QK78 Gm17971-201ENSMUST00000190239 806 ntBASIC16.3■□□□□ 0.2
Gm3139J3QK78 CT009713.7-201ENSMUST00000224689 571 ntBASIC16.3■□□□□ 0.2
Gm3139J3QK78 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm3139J3QK78 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm3139J3QK78 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm3139J3QK78 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm3139J3QK78 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Gm3139J3QK78 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm3139J3QK78 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm3139J3QK78 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC16.3■□□□□ 0.2
Gm3139J3QK78 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Gm3139J3QK78 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Gm3139J3QK78 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Gm3139J3QK78 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Gm3139J3QK78 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm3139J3QK78 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm3139J3QK78 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Gm3139J3QK78 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm3139J3QK78 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm3139J3QK78 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm3139J3QK78 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm3139J3QK78 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC16.29■□□□□ 0.2
Gm3139J3QK78 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Gm3139J3QK78 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm3139J3QK78 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm3139J3QK78 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm3139J3QK78 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm3139J3QK78 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC16.29■□□□□ 0.2
Gm3139J3QK78 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm3139J3QK78 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm3139J3QK78 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC16.29■□□□□ 0.2
Gm3139J3QK78 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm3139J3QK78 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Gm3139J3QK78 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Gm3139J3QK78 Gm32996-201ENSMUST00000199828 1447 ntBASIC16.28■□□□□ 0.2
Gm3139J3QK78 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Gm3139J3QK78 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Gm3139J3QK78 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
Gm3139J3QK78 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Gm3139J3QK78 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Gm3139J3QK78 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Gm3139J3QK78 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Gm3139J3QK78 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Gm3139J3QK78 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Gm3139J3QK78 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
Gm3139J3QK78 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC16.28■□□□□ 0.2
Gm3139J3QK78 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC16.28■□□□□ 0.2
Gm3139J3QK78 AC108846.1-201ENSMUST00000214531 513 ntBASIC16.28■□□□□ 0.2
Gm3139J3QK78 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC16.28■□□□□ 0.2
Gm3139J3QK78 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Gm3139J3QK78 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Gm3139J3QK78 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Gm3139J3QK78 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Gm3139J3QK78 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Gm3139J3QK78 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Gm3139J3QK78 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Gm3139J3QK78 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Gm3139J3QK78 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Gm3139J3QK78 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Gm3139J3QK78 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Gm3139J3QK78 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Gm3139J3QK78 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Gm3139J3QK78 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Gm3139J3QK78 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC16.27■□□□□ 0.2
Gm3139J3QK78 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Gm3139J3QK78 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Gm3139J3QK78 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Gm3139J3QK78 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Gm3139J3QK78 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC16.27■□□□□ 0.2
Gm3139J3QK78 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC16.27■□□□□ 0.2
Gm3139J3QK78 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.2
Gm3139J3QK78 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC16.27■□□□□ 0.2
Gm3139J3QK78 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC16.27■□□□□ 0.2
Gm3139J3QK78 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC16.27■□□□□ 0.2
Gm3139J3QK78 Gm44454-201ENSMUST00000198541 138 ntBASIC16.27■□□□□ 0.2
Gm3139J3QK78 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC16.27■□□□□ 0.2
Gm3139J3QK78 Spr-ps1-201ENSMUST00000089584 605 ntBASIC16.27■□□□□ 0.2
Gm3139J3QK78 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Gm3139J3QK78 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Gm3139J3QK78 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Gm3139J3QK78 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Gm3139J3QK78 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Gm3139J3QK78 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Gm3139J3QK78 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Gm3139J3QK78 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Gm3139J3QK78 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Gm3139J3QK78 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms