Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ube4aE9Q735 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ube4aE9Q735 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ube4aE9Q735 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ube4aE9Q735 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ube4aE9Q735 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ube4aE9Q735 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ube4aE9Q735 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Ube4aE9Q735 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ube4aE9Q735 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ube4aE9Q735 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ube4aE9Q735 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Ube4aE9Q735 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Ube4aE9Q735 Gm15173-201ENSMUST00000122049 433 ntBASIC19.62■□□□□ 0.73
Ube4aE9Q735 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Ube4aE9Q735 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC19.62■□□□□ 0.73
Ube4aE9Q735 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC19.62■□□□□ 0.73
Ube4aE9Q735 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC19.62■□□□□ 0.73
Ube4aE9Q735 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ube4aE9Q735 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC19.62■□□□□ 0.73
Ube4aE9Q735 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Ube4aE9Q735 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC19.62■□□□□ 0.73
Ube4aE9Q735 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC19.62■□□□□ 0.73
Ube4aE9Q735 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ube4aE9Q735 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ube4aE9Q735 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ube4aE9Q735 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Ube4aE9Q735 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ube4aE9Q735 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ube4aE9Q735 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ube4aE9Q735 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Ube4aE9Q735 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Ube4aE9Q735 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Ube4aE9Q735 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ube4aE9Q735 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Ube4aE9Q735 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ube4aE9Q735 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC19.61■□□□□ 0.73
Ube4aE9Q735 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ube4aE9Q735 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Ube4aE9Q735 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Ube4aE9Q735 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Ube4aE9Q735 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ube4aE9Q735 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Ube4aE9Q735 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ube4aE9Q735 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Ube4aE9Q735 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Ube4aE9Q735 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC19.61■□□□□ 0.73
Ube4aE9Q735 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC19.61■□□□□ 0.73
Ube4aE9Q735 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Ube4aE9Q735 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC19.61■□□□□ 0.73
Ube4aE9Q735 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Ube4aE9Q735 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC19.61■□□□□ 0.73
Ube4aE9Q735 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC19.61■□□□□ 0.73
Ube4aE9Q735 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Ube4aE9Q735 Gm5867-201ENSMUST00000063197 592 ntBASIC19.61■□□□□ 0.73
Ube4aE9Q735 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ube4aE9Q735 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ube4aE9Q735 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ube4aE9Q735 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC19.61■□□□□ 0.73
Ube4aE9Q735 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Ube4aE9Q735 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ube4aE9Q735 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ube4aE9Q735 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC19.61■□□□□ 0.73
Ube4aE9Q735 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ube4aE9Q735 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Ube4aE9Q735 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ube4aE9Q735 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Ube4aE9Q735 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ube4aE9Q735 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ube4aE9Q735 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ube4aE9Q735 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC19.6■□□□□ 0.73
Ube4aE9Q735 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Ube4aE9Q735 Gm5364-201ENSMUST00000216789 889 ntBASIC19.6■□□□□ 0.73
Ube4aE9Q735 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ube4aE9Q735 AV026068-213ENSMUST00000223675 1171 ntBASIC19.6■□□□□ 0.73
Ube4aE9Q735 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ube4aE9Q735 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Ube4aE9Q735 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ube4aE9Q735 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Ube4aE9Q735 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ube4aE9Q735 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ube4aE9Q735 Gm36858-201ENSMUST00000194501 2391 ntBASIC19.59■□□□□ 0.73
Ube4aE9Q735 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ube4aE9Q735 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ube4aE9Q735 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Ube4aE9Q735 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Ube4aE9Q735 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC19.59■□□□□ 0.73
Ube4aE9Q735 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Ube4aE9Q735 Ddx41-204ENSMUST00000224765 2199 ntBASIC19.59■□□□□ 0.73
Ube4aE9Q735 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ube4aE9Q735 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC19.59■□□□□ 0.73
Ube4aE9Q735 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
Ube4aE9Q735 Gm6550-201ENSMUST00000187574 993 ntBASIC19.59■□□□□ 0.73
Ube4aE9Q735 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC19.59■□□□□ 0.73
Ube4aE9Q735 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ube4aE9Q735 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Ube4aE9Q735 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Ube4aE9Q735 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC19.59■□□□□ 0.73
Ube4aE9Q735 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ube4aE9Q735 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms