Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Gm4535-201ENSMUST00000182274 558 ntBASIC13.78□□□□□ -0.2
Col6a4A2AX52 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col6a4A2AX52 Gm10355-201ENSMUST00000097146 517 ntBASIC13.78□□□□□ -0.2
Col6a4A2AX52 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC13.78□□□□□ -0.2
Col6a4A2AX52 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Col6a4A2AX52 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col6a4A2AX52 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
Col6a4A2AX52 Gm15442-201ENSMUST00000117905 1527 ntBASIC13.77□□□□□ -0.2
Col6a4A2AX52 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Col6a4A2AX52 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC13.77□□□□□ -0.2
Col6a4A2AX52 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Col6a4A2AX52 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC13.77□□□□□ -0.2
Col6a4A2AX52 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Col6a4A2AX52 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.2
Col6a4A2AX52 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Col6a4A2AX52 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Col6a4A2AX52 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Col6a4A2AX52 Gm13127-201ENSMUST00000118978 1389 ntBASIC13.77□□□□□ -0.21
Col6a4A2AX52 Gm6184-201ENSMUST00000120403 1261 ntBASIC13.77□□□□□ -0.21
Col6a4A2AX52 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Col6a4A2AX52 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Col6a4A2AX52 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Col6a4A2AX52 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Col6a4A2AX52 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Col6a4A2AX52 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Col6a4A2AX52 Gm45203-201ENSMUST00000206384 1831 ntBASIC13.77□□□□□ -0.21
Col6a4A2AX52 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col6a4A2AX52 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC13.76□□□□□ -0.21
Col6a4A2AX52 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC13.76□□□□□ -0.21
Col6a4A2AX52 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col6a4A2AX52 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Col6a4A2AX52 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col6a4A2AX52 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col6a4A2AX52 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Col6a4A2AX52 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col6a4A2AX52 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col6a4A2AX52 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col6a4A2AX52 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col6a4A2AX52 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Col6a4A2AX52 AL590614.2-201ENSMUST00000225374 1937 ntBASIC13.76□□□□□ -0.21
Col6a4A2AX52 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col6a4A2AX52 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Col6a4A2AX52 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col6a4A2AX52 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col6a4A2AX52 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Col6a4A2AX52 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC13.76□□□□□ -0.21
Col6a4A2AX52 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
Col6a4A2AX52 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC13.76□□□□□ -0.21
Col6a4A2AX52 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col6a4A2AX52 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
Col6a4A2AX52 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC13.76□□□□□ -0.21
Col6a4A2AX52 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC13.76□□□□□ -0.21
Col6a4A2AX52 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col6a4A2AX52 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Col6a4A2AX52 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col6a4A2AX52 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Col6a4A2AX52 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col6a4A2AX52 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col6a4A2AX52 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col6a4A2AX52 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col6a4A2AX52 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col6a4A2AX52 Gm26917-202ENSMUST00000192833 3329 ntBASIC13.75□□□□□ -0.21
Col6a4A2AX52 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Col6a4A2AX52 Mir3113-201ENSMUST00000175478 76 ntBASIC13.75□□□□□ -0.21
Col6a4A2AX52 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Col6a4A2AX52 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col6a4A2AX52 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col6a4A2AX52 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC13.75□□□□□ -0.21
Col6a4A2AX52 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col6a4A2AX52 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col6a4A2AX52 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col6a4A2AX52 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC13.75□□□□□ -0.21
Col6a4A2AX52 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col6a4A2AX52 Gm25990-201ENSMUST00000102440 86 ntBASIC13.75□□□□□ -0.21
Col6a4A2AX52 AC090659.1-201ENSMUST00000224334 768 ntBASIC13.75□□□□□ -0.21
Col6a4A2AX52 Chchd1-203ENSMUST00000224633 557 ntBASIC13.75□□□□□ -0.21
Col6a4A2AX52 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col6a4A2AX52 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Col6a4A2AX52 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Col6a4A2AX52 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Col6a4A2AX52 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col6a4A2AX52 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col6a4A2AX52 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col6a4A2AX52 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col6a4A2AX52 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Col6a4A2AX52 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC13.74□□□□□ -0.21
Col6a4A2AX52 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col6a4A2AX52 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col6a4A2AX52 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC13.74□□□□□ -0.21
Col6a4A2AX52 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
Col6a4A2AX52 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC13.74□□□□□ -0.21
Col6a4A2AX52 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col6a4A2AX52 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Col6a4A2AX52 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col6a4A2AX52 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Col6a4A2AX52 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col6a4A2AX52 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col6a4A2AX52 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col6a4A2AX52 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC13.74□□□□□ -0.21
Col6a4A2AX52 Gm12497-201ENSMUST00000138778 237 ntBASIC13.74□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms