Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Scn3aA2ASI5 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Scn3aA2ASI5 Gm27628-201ENSMUST00000184911 107 ntBASIC18.18■□□□□ 0.5
Scn3aA2ASI5 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC18.18■□□□□ 0.5
Scn3aA2ASI5 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC18.18■□□□□ 0.5
Scn3aA2ASI5 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC18.18■□□□□ 0.5
Scn3aA2ASI5 Gm8655-201ENSMUST00000221159 852 ntBASIC18.18■□□□□ 0.5
Scn3aA2ASI5 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Scn3aA2ASI5 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Scn3aA2ASI5 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Scn3aA2ASI5 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Scn3aA2ASI5 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Scn3aA2ASI5 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Scn3aA2ASI5 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Scn3aA2ASI5 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
Scn3aA2ASI5 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Scn3aA2ASI5 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Scn3aA2ASI5 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Scn3aA2ASI5 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Scn3aA2ASI5 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Scn3aA2ASI5 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Scn3aA2ASI5 AC154527.4-201ENSMUST00000224364 1667 ntBASIC18.18■□□□□ 0.5
Scn3aA2ASI5 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Scn3aA2ASI5 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Scn3aA2ASI5 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Scn3aA2ASI5 Gm11779-201ENSMUST00000118541 368 ntBASIC18.17■□□□□ 0.5
Scn3aA2ASI5 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Scn3aA2ASI5 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Scn3aA2ASI5 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC18.17■□□□□ 0.5
Scn3aA2ASI5 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Scn3aA2ASI5 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Scn3aA2ASI5 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Scn3aA2ASI5 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Scn3aA2ASI5 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Scn3aA2ASI5 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Scn3aA2ASI5 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Scn3aA2ASI5 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Scn3aA2ASI5 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Scn3aA2ASI5 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC18.17■□□□□ 0.5
Scn3aA2ASI5 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC18.17■□□□□ 0.5
Scn3aA2ASI5 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC18.17■□□□□ 0.5
Scn3aA2ASI5 AC159106.1-201ENSMUST00000224421 690 ntBASIC18.17■□□□□ 0.5
Scn3aA2ASI5 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC18.17■□□□□ 0.5
Scn3aA2ASI5 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Scn3aA2ASI5 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Scn3aA2ASI5 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Scn3aA2ASI5 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Scn3aA2ASI5 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Scn3aA2ASI5 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Scn3aA2ASI5 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Scn3aA2ASI5 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Scn3aA2ASI5 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC18.16■□□□□ 0.5
Scn3aA2ASI5 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC18.16■□□□□ 0.5
Scn3aA2ASI5 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Scn3aA2ASI5 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Scn3aA2ASI5 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Scn3aA2ASI5 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Scn3aA2ASI5 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Scn3aA2ASI5 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Scn3aA2ASI5 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Scn3aA2ASI5 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Scn3aA2ASI5 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC18.16■□□□□ 0.5
Scn3aA2ASI5 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Scn3aA2ASI5 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Scn3aA2ASI5 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Scn3aA2ASI5 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Scn3aA2ASI5 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
Scn3aA2ASI5 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Scn3aA2ASI5 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scn3aA2ASI5 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Scn3aA2ASI5 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC18.15■□□□□ 0.5
Scn3aA2ASI5 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC18.15■□□□□ 0.5
Scn3aA2ASI5 Gm27646-201ENSMUST00000183989 110 ntBASIC18.15■□□□□ 0.5
Scn3aA2ASI5 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scn3aA2ASI5 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC18.15■□□□□ 0.5
Scn3aA2ASI5 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC18.15■□□□□ 0.5
Scn3aA2ASI5 Psmb5-202ENSMUST00000227257 622 ntBASIC18.15■□□□□ 0.5
Scn3aA2ASI5 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scn3aA2ASI5 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scn3aA2ASI5 Gm15590-201ENSMUST00000078419 552 ntBASIC18.15■□□□□ 0.5
Scn3aA2ASI5 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Scn3aA2ASI5 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scn3aA2ASI5 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Scn3aA2ASI5 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scn3aA2ASI5 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Scn3aA2ASI5 Gm6184-201ENSMUST00000120403 1261 ntBASIC18.15■□□□□ 0.5
Scn3aA2ASI5 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC18.15■□□□□ 0.5
Scn3aA2ASI5 AC084391.1-201ENSMUST00000200651 141 ntBASIC18.15■□□□□ 0.5
Scn3aA2ASI5 AV026068-213ENSMUST00000223675 1171 ntBASIC18.15■□□□□ 0.5
Scn3aA2ASI5 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scn3aA2ASI5 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scn3aA2ASI5 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Scn3aA2ASI5 Gm3928-201ENSMUST00000121141 1307 ntBASIC18.15■□□□□ 0.5
Scn3aA2ASI5 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
Scn3aA2ASI5 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Scn3aA2ASI5 Gm4609-201ENSMUST00000106443 1002 ntBASIC18.14■□□□□ 0.49
Scn3aA2ASI5 Gm5138-201ENSMUST00000113842 1002 ntBASIC18.14■□□□□ 0.49
Scn3aA2ASI5 Gm4995-201ENSMUST00000117247 432 ntBASIC18.14■□□□□ 0.49
Scn3aA2ASI5 Gm15191-201ENSMUST00000117933 1000 ntBASIC18.14■□□□□ 0.49
Scn3aA2ASI5 Gm12182-201ENSMUST00000118655 1008 ntBASIC18.14■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms