Protein–RNA interactions for Protein: A0A0B4J1G7

Trbv1, T cell receptor beta, variable 1 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv1A0A0B4J1G7 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC12.89□□□□□ -0.35
Trbv1A0A0B4J1G7 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv1A0A0B4J1G7 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv1A0A0B4J1G7 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC12.89□□□□□ -0.35
Trbv1A0A0B4J1G7 Gm5643-201ENSMUST00000117081 966 ntBASIC12.89□□□□□ -0.35
Trbv1A0A0B4J1G7 Gm15378-201ENSMUST00000121894 207 ntBASIC12.89□□□□□ -0.35
Trbv1A0A0B4J1G7 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv1A0A0B4J1G7 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC12.89□□□□□ -0.35
Trbv1A0A0B4J1G7 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC12.89□□□□□ -0.35
Trbv1A0A0B4J1G7 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv1A0A0B4J1G7 Gm18025-201ENSMUST00000221733 862 ntBASIC12.89□□□□□ -0.35
Trbv1A0A0B4J1G7 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Trbv1A0A0B4J1G7 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC12.89□□□□□ -0.35
Trbv1A0A0B4J1G7 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv1A0A0B4J1G7 Asic1-205ENSMUST00000228185 1818 ntBASIC12.89□□□□□ -0.35
Trbv1A0A0B4J1G7 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv1A0A0B4J1G7 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Trbv1A0A0B4J1G7 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv1A0A0B4J1G7 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv1A0A0B4J1G7 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv1A0A0B4J1G7 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv1A0A0B4J1G7 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv1A0A0B4J1G7 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
Trbv1A0A0B4J1G7 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv1A0A0B4J1G7 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv1A0A0B4J1G7 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv1A0A0B4J1G7 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Trbv1A0A0B4J1G7 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv1A0A0B4J1G7 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv1A0A0B4J1G7 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv1A0A0B4J1G7 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv1A0A0B4J1G7 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv1A0A0B4J1G7 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Trbv1A0A0B4J1G7 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv1A0A0B4J1G7 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Trbv1A0A0B4J1G7 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv1A0A0B4J1G7 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv1A0A0B4J1G7 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC12.88□□□□□ -0.35
Trbv1A0A0B4J1G7 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC12.88□□□□□ -0.35
Trbv1A0A0B4J1G7 Gm10653-202ENSMUST00000139570 835 ntBASIC12.88□□□□□ -0.35
Trbv1A0A0B4J1G7 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv1A0A0B4J1G7 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv1A0A0B4J1G7 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC12.88□□□□□ -0.35
Trbv1A0A0B4J1G7 Spcs1-207ENSMUST00000228767 1008 ntBASIC12.88□□□□□ -0.35
Trbv1A0A0B4J1G7 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv1A0A0B4J1G7 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC12.88□□□□□ -0.35
Trbv1A0A0B4J1G7 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv1A0A0B4J1G7 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv1A0A0B4J1G7 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv1A0A0B4J1G7 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv1A0A0B4J1G7 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv1A0A0B4J1G7 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Trbv1A0A0B4J1G7 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv1A0A0B4J1G7 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv1A0A0B4J1G7 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv1A0A0B4J1G7 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv1A0A0B4J1G7 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv1A0A0B4J1G7 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv1A0A0B4J1G7 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC12.88□□□□□ -0.35
Trbv1A0A0B4J1G7 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv1A0A0B4J1G7 Gm10654-201ENSMUST00000098653 1633 ntBASIC12.88□□□□□ -0.35
Trbv1A0A0B4J1G7 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv1A0A0B4J1G7 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv1A0A0B4J1G7 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv1A0A0B4J1G7 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Trbv1A0A0B4J1G7 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv1A0A0B4J1G7 Prob1-201ENSMUST00000097619 3021 ntBASIC12.87□□□□□ -0.35
Trbv1A0A0B4J1G7 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv1A0A0B4J1G7 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv1A0A0B4J1G7 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC12.87□□□□□ -0.35
Trbv1A0A0B4J1G7 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC12.87□□□□□ -0.35
Trbv1A0A0B4J1G7 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
Trbv1A0A0B4J1G7 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv1A0A0B4J1G7 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv1A0A0B4J1G7 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv1A0A0B4J1G7 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv1A0A0B4J1G7 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv1A0A0B4J1G7 Gm8520-201ENSMUST00000186517 868 ntBASIC12.87□□□□□ -0.35
Trbv1A0A0B4J1G7 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv1A0A0B4J1G7 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC12.87□□□□□ -0.35
Trbv1A0A0B4J1G7 AC166341.7-201ENSMUST00000221698 126 ntBASIC12.87□□□□□ -0.35
Trbv1A0A0B4J1G7 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv1A0A0B4J1G7 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv1A0A0B4J1G7 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Trbv1A0A0B4J1G7 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv1A0A0B4J1G7 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv1A0A0B4J1G7 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv1A0A0B4J1G7 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv1A0A0B4J1G7 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv1A0A0B4J1G7 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv1A0A0B4J1G7 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv1A0A0B4J1G7 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv1A0A0B4J1G7 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Trbv1A0A0B4J1G7 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv1A0A0B4J1G7 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv1A0A0B4J1G7 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC12.86□□□□□ -0.35
Trbv1A0A0B4J1G7 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Trbv1A0A0B4J1G7 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv1A0A0B4J1G7 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Trbv1A0A0B4J1G7 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms