Protein–RNA interactions for Protein: A0A075B5Z4

Trav1, T cell receptor alpha variable 1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav1A0A075B5Z4 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Trav1A0A075B5Z4 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Trav1A0A075B5Z4 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trav1A0A075B5Z4 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav1A0A075B5Z4 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav1A0A075B5Z4 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav1A0A075B5Z4 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Trav1A0A075B5Z4 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC15.22■□□□□ 0.03
Trav1A0A075B5Z4 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trav1A0A075B5Z4 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trav1A0A075B5Z4 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav1A0A075B5Z4 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav1A0A075B5Z4 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav1A0A075B5Z4 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav1A0A075B5Z4 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC15.22■□□□□ 0.03
Trav1A0A075B5Z4 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav1A0A075B5Z4 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav1A0A075B5Z4 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Trav1A0A075B5Z4 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trav1A0A075B5Z4 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Trav1A0A075B5Z4 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav1A0A075B5Z4 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Trav1A0A075B5Z4 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav1A0A075B5Z4 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trav1A0A075B5Z4 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav1A0A075B5Z4 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trav1A0A075B5Z4 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav1A0A075B5Z4 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trav1A0A075B5Z4 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC15.21■□□□□ 0.03
Trav1A0A075B5Z4 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trav1A0A075B5Z4 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav1A0A075B5Z4 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC15.21■□□□□ 0.03
Trav1A0A075B5Z4 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav1A0A075B5Z4 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav1A0A075B5Z4 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav1A0A075B5Z4 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trav1A0A075B5Z4 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav1A0A075B5Z4 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trav1A0A075B5Z4 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav1A0A075B5Z4 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav1A0A075B5Z4 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC15.21■□□□□ 0.03
Trav1A0A075B5Z4 AC122351.1-201ENSMUST00000220467 126 ntBASIC15.21■□□□□ 0.03
Trav1A0A075B5Z4 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav1A0A075B5Z4 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav1A0A075B5Z4 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trav1A0A075B5Z4 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav1A0A075B5Z4 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trav1A0A075B5Z4 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trav1A0A075B5Z4 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav1A0A075B5Z4 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav1A0A075B5Z4 Gm8668-201ENSMUST00000120559 1447 ntBASIC15.2■□□□□ 0.02
Trav1A0A075B5Z4 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav1A0A075B5Z4 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav1A0A075B5Z4 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav1A0A075B5Z4 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav1A0A075B5Z4 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Trav1A0A075B5Z4 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC15.2■□□□□ 0.02
Trav1A0A075B5Z4 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC15.2■□□□□ 0.02
Trav1A0A075B5Z4 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav1A0A075B5Z4 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC15.2■□□□□ 0.02
Trav1A0A075B5Z4 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC15.2■□□□□ 0.02
Trav1A0A075B5Z4 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav1A0A075B5Z4 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Trav1A0A075B5Z4 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav1A0A075B5Z4 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav1A0A075B5Z4 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC15.2■□□□□ 0.02
Trav1A0A075B5Z4 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav1A0A075B5Z4 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC15.2■□□□□ 0.02
Trav1A0A075B5Z4 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav1A0A075B5Z4 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav1A0A075B5Z4 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Trav1A0A075B5Z4 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav1A0A075B5Z4 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav1A0A075B5Z4 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav1A0A075B5Z4 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav1A0A075B5Z4 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Trav1A0A075B5Z4 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav1A0A075B5Z4 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav1A0A075B5Z4 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav1A0A075B5Z4 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
Trav1A0A075B5Z4 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav1A0A075B5Z4 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trav1A0A075B5Z4 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav1A0A075B5Z4 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC15.19■□□□□ 0.02
Trav1A0A075B5Z4 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav1A0A075B5Z4 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav1A0A075B5Z4 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC15.19■□□□□ 0.02
Trav1A0A075B5Z4 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC15.19■□□□□ 0.02
Trav1A0A075B5Z4 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC15.19■□□□□ 0.02
Trav1A0A075B5Z4 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav1A0A075B5Z4 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC15.19■□□□□ 0.02
Trav1A0A075B5Z4 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav1A0A075B5Z4 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Trav1A0A075B5Z4 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav1A0A075B5Z4 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav1A0A075B5Z4 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav1A0A075B5Z4 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC15.18■□□□□ 0.02
Trav1A0A075B5Z4 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav1A0A075B5Z4 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav1A0A075B5Z4 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms