Protein–RNA interactions for Protein: A0A075B5I2

Trbv4, T cell receptor beta, variable 10 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv4A0A075B5I2 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trbv4A0A075B5I2 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trbv4A0A075B5I2 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC16.44■□□□□ 0.22
Trbv4A0A075B5I2 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trbv4A0A075B5I2 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC16.44■□□□□ 0.22
Trbv4A0A075B5I2 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trbv4A0A075B5I2 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Trbv4A0A075B5I2 AC069562.2-201ENSMUST00000224644 2146 ntBASIC16.44■□□□□ 0.22
Trbv4A0A075B5I2 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trbv4A0A075B5I2 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trbv4A0A075B5I2 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trbv4A0A075B5I2 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trbv4A0A075B5I2 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trbv4A0A075B5I2 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trbv4A0A075B5I2 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trbv4A0A075B5I2 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trbv4A0A075B5I2 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trbv4A0A075B5I2 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trbv4A0A075B5I2 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trbv4A0A075B5I2 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC16.43■□□□□ 0.22
Trbv4A0A075B5I2 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Trbv4A0A075B5I2 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv4A0A075B5I2 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv4A0A075B5I2 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv4A0A075B5I2 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC16.43■□□□□ 0.22
Trbv4A0A075B5I2 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv4A0A075B5I2 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv4A0A075B5I2 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Trbv4A0A075B5I2 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv4A0A075B5I2 Gm9987-201ENSMUST00000069768 567 ntBASIC16.43■□□□□ 0.22
Trbv4A0A075B5I2 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv4A0A075B5I2 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv4A0A075B5I2 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv4A0A075B5I2 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv4A0A075B5I2 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv4A0A075B5I2 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.43■□□□□ 0.22
Trbv4A0A075B5I2 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv4A0A075B5I2 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC16.43■□□□□ 0.22
Trbv4A0A075B5I2 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv4A0A075B5I2 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv4A0A075B5I2 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv4A0A075B5I2 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv4A0A075B5I2 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv4A0A075B5I2 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv4A0A075B5I2 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv4A0A075B5I2 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC16.42■□□□□ 0.22
Trbv4A0A075B5I2 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv4A0A075B5I2 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv4A0A075B5I2 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv4A0A075B5I2 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv4A0A075B5I2 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv4A0A075B5I2 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv4A0A075B5I2 Gm11355-201ENSMUST00000121120 306 ntBASIC16.42■□□□□ 0.22
Trbv4A0A075B5I2 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Trbv4A0A075B5I2 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC16.42■□□□□ 0.22
Trbv4A0A075B5I2 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv4A0A075B5I2 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv4A0A075B5I2 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv4A0A075B5I2 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv4A0A075B5I2 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC16.42■□□□□ 0.22
Trbv4A0A075B5I2 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Trbv4A0A075B5I2 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv4A0A075B5I2 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv4A0A075B5I2 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv4A0A075B5I2 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
Trbv4A0A075B5I2 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trbv4A0A075B5I2 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trbv4A0A075B5I2 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trbv4A0A075B5I2 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trbv4A0A075B5I2 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Trbv4A0A075B5I2 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trbv4A0A075B5I2 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trbv4A0A075B5I2 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trbv4A0A075B5I2 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trbv4A0A075B5I2 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC16.41■□□□□ 0.22
Trbv4A0A075B5I2 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trbv4A0A075B5I2 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC16.41■□□□□ 0.22
Trbv4A0A075B5I2 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Trbv4A0A075B5I2 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trbv4A0A075B5I2 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC16.41■□□□□ 0.22
Trbv4A0A075B5I2 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trbv4A0A075B5I2 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trbv4A0A075B5I2 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC16.41■□□□□ 0.22
Trbv4A0A075B5I2 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC16.41■□□□□ 0.22
Trbv4A0A075B5I2 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trbv4A0A075B5I2 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trbv4A0A075B5I2 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Trbv4A0A075B5I2 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trbv4A0A075B5I2 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trbv4A0A075B5I2 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trbv4A0A075B5I2 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trbv4A0A075B5I2 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trbv4A0A075B5I2 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Trbv4A0A075B5I2 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trbv4A0A075B5I2 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trbv4A0A075B5I2 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trbv4A0A075B5I2 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trbv4A0A075B5I2 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trbv4A0A075B5I2 Gm32996-201ENSMUST00000199828 1447 ntBASIC16.4■□□□□ 0.22
Trbv4A0A075B5I2 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC16.4■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms