Protein–RNA interactions for Protein: Q9P1Z3

HCN3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, humanhuman

Predictions only

Length 774 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN3Q9P1Z3 MIR4727-201ENST00000622232 55 ntBASIC3.99□□□□□ -1.77
HCN3Q9P1Z3 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
HCN3Q9P1Z3 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.99□□□□□ -1.77
HCN3Q9P1Z3 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC3.99□□□□□ -1.77
HCN3Q9P1Z3 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
HCN3Q9P1Z3 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC3.98□□□□□ -1.77
HCN3Q9P1Z3 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
HCN3Q9P1Z3 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.98□□□□□ -1.77
HCN3Q9P1Z3 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
HCN3Q9P1Z3 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
HCN3Q9P1Z3 RNU1-15P-201ENST00000353977 144 ntBASIC3.98□□□□□ -1.77
HCN3Q9P1Z3 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.98□□□□□ -1.77
HCN3Q9P1Z3 RNU6-1207P-201ENST00000384343 107 ntBASIC3.98□□□□□ -1.77
HCN3Q9P1Z3 SNORA70C-201ENST00000384538 135 ntBASIC3.98□□□□□ -1.77
HCN3Q9P1Z3 U8.14-201ENST00000390843 143 ntBASIC3.98□□□□□ -1.77
HCN3Q9P1Z3 MIR1179-201ENST00000408703 91 ntBASIC3.98□□□□□ -1.77
HCN3Q9P1Z3 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC3.98□□□□□ -1.77
HCN3Q9P1Z3 RPS23P10-201ENST00000416185 486 ntBASIC3.98□□□□□ -1.77
HCN3Q9P1Z3 Z99497.1-201ENST00000421282 135 ntBASIC3.98□□□□□ -1.77
HCN3Q9P1Z3 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC3.98□□□□□ -1.77
HCN3Q9P1Z3 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC3.98□□□□□ -1.77
HCN3Q9P1Z3 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.98□□□□□ -1.77
HCN3Q9P1Z3 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.98□□□□□ -1.77
HCN3Q9P1Z3 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
HCN3Q9P1Z3 MTND2P4-201ENST00000445034 1004 ntBASIC3.98□□□□□ -1.77
HCN3Q9P1Z3 AP000542.1-201ENST00000448473 371 ntBASIC3.98□□□□□ -1.77
HCN3Q9P1Z3 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.98□□□□□ -1.77
HCN3Q9P1Z3 RPL7P19-201ENST00000469948 618 ntBASIC3.98□□□□□ -1.77
HCN3Q9P1Z3 CREM-226ENST00000469949 721 ntTSL 3 BASIC3.98□□□□□ -1.77
HCN3Q9P1Z3 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC3.98□□□□□ -1.77
HCN3Q9P1Z3 AC007537.2-201ENST00000472093 511 ntBASIC3.98□□□□□ -1.77
HCN3Q9P1Z3 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
HCN3Q9P1Z3 AC021678.1-201ENST00000505195 936 ntBASIC3.98□□□□□ -1.77
HCN3Q9P1Z3 AC022447.3-201ENST00000506865 495 ntBASIC3.98□□□□□ -1.77
HCN3Q9P1Z3 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.98□□□□□ -1.77
HCN3Q9P1Z3 AC117522.2-201ENST00000510049 657 ntBASIC3.98□□□□□ -1.77
HCN3Q9P1Z3 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC3.98□□□□□ -1.77
HCN3Q9P1Z3 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC3.98□□□□□ -1.77
HCN3Q9P1Z3 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.98□□□□□ -1.77
HCN3Q9P1Z3 RNU6-714P-201ENST00000516963 103 ntBASIC3.98□□□□□ -1.77
HCN3Q9P1Z3 IFITM8P-201ENST00000522529 394 ntBASIC3.98□□□□□ -1.77
HCN3Q9P1Z3 AP004371.1-201ENST00000525240 214 ntBASIC3.98□□□□□ -1.77
HCN3Q9P1Z3 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
HCN3Q9P1Z3 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC3.98□□□□□ -1.77
HCN3Q9P1Z3 AC091515.1-201ENST00000548110 679 ntBASIC3.98□□□□□ -1.77
HCN3Q9P1Z3 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.98□□□□□ -1.77
HCN3Q9P1Z3 AL121603.1-201ENST00000553815 142 ntBASIC3.98□□□□□ -1.77
HCN3Q9P1Z3 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC3.98□□□□□ -1.77
HCN3Q9P1Z3 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC3.98□□□□□ -1.77
HCN3Q9P1Z3 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.98□□□□□ -1.77
HCN3Q9P1Z3 AC022655.2-201ENST00000577280 318 ntBASIC3.98□□□□□ -1.77
HCN3Q9P1Z3 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.98□□□□□ -1.77
HCN3Q9P1Z3 AC110760.3-201ENST00000598794 467 ntBASIC3.98□□□□□ -1.77
HCN3Q9P1Z3 PRELID3BP8-201ENST00000604148 295 ntBASIC3.98□□□□□ -1.77
HCN3Q9P1Z3 AL031176.1-201ENST00000604554 466 ntBASIC3.98□□□□□ -1.77
HCN3Q9P1Z3 AC073114.1-201ENST00000612027 490 ntBASIC3.98□□□□□ -1.77
HCN3Q9P1Z3 AL590099.1-201ENST00000615276 138 ntBASIC3.98□□□□□ -1.77
HCN3Q9P1Z3 SMCR2_2.1-201ENST00000619783 161 ntBASIC3.98□□□□□ -1.77
HCN3Q9P1Z3 MIR8059-201ENST00000620427 81 ntBASIC3.98□□□□□ -1.77
HCN3Q9P1Z3 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
HCN3Q9P1Z3 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
HCN3Q9P1Z3 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
HCN3Q9P1Z3 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.98□□□□□ -1.77
HCN3Q9P1Z3 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
HCN3Q9P1Z3 AL513185.3-201ENST00000433335 1300 ntBASIC3.97□□□□□ -1.77
HCN3Q9P1Z3 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.97□□□□□ -1.77
HCN3Q9P1Z3 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
HCN3Q9P1Z3 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC3.97□□□□□ -1.77
HCN3Q9P1Z3 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
HCN3Q9P1Z3 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
HCN3Q9P1Z3 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
HCN3Q9P1Z3 RNU6-335P-201ENST00000364563 113 ntBASIC3.97□□□□□ -1.77
HCN3Q9P1Z3 RNA5SP235-201ENST00000365411 114 ntBASIC3.97□□□□□ -1.77
HCN3Q9P1Z3 RNU6-629P-201ENST00000384061 103 ntBASIC3.97□□□□□ -1.77
HCN3Q9P1Z3 SNORA26.8-201ENST00000391306 124 ntBASIC3.97□□□□□ -1.77
HCN3Q9P1Z3 RPS26P8-201ENST00000393490 348 ntBASIC3.97□□□□□ -1.77
HCN3Q9P1Z3 MTCYBP36-201ENST00000404146 440 ntBASIC3.97□□□□□ -1.77
HCN3Q9P1Z3 MIR1305-201ENST00000408300 86 ntBASIC3.97□□□□□ -1.77
HCN3Q9P1Z3 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC3.97□□□□□ -1.77
HCN3Q9P1Z3 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC3.97□□□□□ -1.77
HCN3Q9P1Z3 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
HCN3Q9P1Z3 RBMY1KP-201ENST00000423480 476 ntBASIC3.97□□□□□ -1.77
HCN3Q9P1Z3 BX119904.4-201ENST00000424402 301 ntBASIC3.97□□□□□ -1.77
HCN3Q9P1Z3 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC3.97□□□□□ -1.77
HCN3Q9P1Z3 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC3.97□□□□□ -1.77
HCN3Q9P1Z3 AL365184.2-201ENST00000431139 435 ntBASIC3.97□□□□□ -1.77
HCN3Q9P1Z3 EZH2P1-201ENST00000431167 291 ntBASIC3.97□□□□□ -1.77
HCN3Q9P1Z3 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.97□□□□□ -1.77
HCN3Q9P1Z3 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC3.97□□□□□ -1.77
HCN3Q9P1Z3 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.97□□□□□ -1.77
HCN3Q9P1Z3 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.97□□□□□ -1.77
HCN3Q9P1Z3 RPL5P23-201ENST00000496040 868 ntBASIC3.97□□□□□ -1.77
HCN3Q9P1Z3 RPS27AP13-201ENST00000498403 237 ntBASIC3.97□□□□□ -1.77
HCN3Q9P1Z3 AC006499.5-201ENST00000505037 514 ntBASIC3.97□□□□□ -1.77
HCN3Q9P1Z3 AC116347.2-201ENST00000514912 523 ntBASIC3.97□□□□□ -1.77
HCN3Q9P1Z3 MTCO1P35-201ENST00000515270 228 ntBASIC3.97□□□□□ -1.77
HCN3Q9P1Z3 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.97□□□□□ -1.77
HCN3Q9P1Z3 NDUFA5P2-201ENST00000519723 344 ntBASIC3.97□□□□□ -1.77
HCN3Q9P1Z3 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC3.97□□□□□ -1.77
HCN3Q9P1Z3 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms