Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
SSSCA1O60232 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
SSSCA1O60232 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
SSSCA1O60232 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC2.01□□□□□ -2.09
SSSCA1O60232 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.01□□□□□ -2.09
SSSCA1O60232 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.01□□□□□ -2.09
SSSCA1O60232 RPL35AP12-201ENST00000425362 338 ntBASIC2.01□□□□□ -2.09
SSSCA1O60232 AL512649.1-201ENST00000428997 581 ntBASIC2.01□□□□□ -2.09
SSSCA1O60232 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC2.01□□□□□ -2.09
SSSCA1O60232 LSM1P1-201ENST00000438629 273 ntBASIC2.01□□□□□ -2.09
SSSCA1O60232 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.01□□□□□ -2.09
SSSCA1O60232 AC009961.3-201ENST00000449832 765 ntBASIC2.01□□□□□ -2.09
SSSCA1O60232 RNU7-27P-201ENST00000459281 62 ntBASIC2.01□□□□□ -2.09
SSSCA1O60232 HIGD1AP13-201ENST00000509878 289 ntBASIC2.01□□□□□ -2.09
SSSCA1O60232 AC074250.1-201ENST00000511117 192 ntBASIC2.01□□□□□ -2.09
SSSCA1O60232 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.01□□□□□ -2.09
SSSCA1O60232 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC2.01□□□□□ -2.09
SSSCA1O60232 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC2.01□□□□□ -2.09
SSSCA1O60232 RGS4-207ENST00000527809 817 ntTSL 4 BASIC2.01□□□□□ -2.09
SSSCA1O60232 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.01□□□□□ -2.09
SSSCA1O60232 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC2.01□□□□□ -2.09
SSSCA1O60232 RPL23AP92-201ENST00000603609 255 ntBASIC2.01□□□□□ -2.09
SSSCA1O60232 AL133507.1-201ENST00000605269 557 ntBASIC2.01□□□□□ -2.09
SSSCA1O60232 AL161734.1-201ENST00000609720 557 ntBASIC2.01□□□□□ -2.09
SSSCA1O60232 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC2.01□□□□□ -2.09
SSSCA1O60232 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC2.01□□□□□ -2.09
SSSCA1O60232 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.01□□□□□ -2.09
SSSCA1O60232 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC2□□□□□ -2.09
SSSCA1O60232 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC2□□□□□ -2.09
SSSCA1O60232 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
SSSCA1O60232 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC2□□□□□ -2.09
SSSCA1O60232 RNU6-50P-201ENST00000362356 103 ntBASIC2□□□□□ -2.09
SSSCA1O60232 RNU6-532P-201ENST00000384318 107 ntBASIC2□□□□□ -2.09
SSSCA1O60232 MIR134-201ENST00000385258 73 ntBASIC2□□□□□ -2.09
SSSCA1O60232 FAT1P1-201ENST00000406588 507 ntBASIC2□□□□□ -2.09
SSSCA1O60232 AC016769.2-201ENST00000414815 475 ntBASIC2□□□□□ -2.09
SSSCA1O60232 TRAPPC2P4-201ENST00000421750 331 ntBASIC2□□□□□ -2.09
SSSCA1O60232 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC2□□□□□ -2.09
SSSCA1O60232 AL050321.1-201ENST00000432363 400 ntBASIC2□□□□□ -2.09
SSSCA1O60232 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC2□□□□□ -2.09
SSSCA1O60232 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC2□□□□□ -2.09
SSSCA1O60232 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC2□□□□□ -2.09
SSSCA1O60232 OR51B8P-201ENST00000449892 769 ntBASIC2□□□□□ -2.09
SSSCA1O60232 AL513343.1-201ENST00000451818 792 ntBASIC2□□□□□ -2.09
SSSCA1O60232 NAMPTP2-201ENST00000505629 1115 ntBASIC2□□□□□ -2.09
SSSCA1O60232 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC2□□□□□ -2.09
SSSCA1O60232 RNA5SP341-201ENST00000516261 117 ntBASIC2□□□□□ -2.09
SSSCA1O60232 RNA5SP367-201ENST00000516557 118 ntBASIC2□□□□□ -2.09
SSSCA1O60232 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC2□□□□□ -2.09
SSSCA1O60232 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC2□□□□□ -2.09
SSSCA1O60232 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2□□□□□ -2.09
SSSCA1O60232 AC087373.1-201ENST00000524920 491 ntBASIC2□□□□□ -2.09
SSSCA1O60232 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC2□□□□□ -2.09
SSSCA1O60232 OSBPL9P3-201ENST00000534523 595 ntBASIC2□□□□□ -2.09
SSSCA1O60232 AC243972.3-201ENST00000539655 198 ntBASIC2□□□□□ -2.09
SSSCA1O60232 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC2□□□□□ -2.09
SSSCA1O60232 AC034105.4-201ENST00000568304 277 ntBASIC2□□□□□ -2.09
SSSCA1O60232 AC009163.5-201ENST00000575421 637 ntBASIC2□□□□□ -2.09
SSSCA1O60232 MIR4446-201ENST00000578505 67 ntBASIC2□□□□□ -2.09
SSSCA1O60232 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC2□□□□□ -2.09
SSSCA1O60232 FO624990.1-201ENST00000636373 85 ntBASIC2□□□□□ -2.09
SSSCA1O60232 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2□□□□□ -2.09
SSSCA1O60232 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2□□□□□ -2.09
SSSCA1O60232 SAGE4P-201ENST00000442271 3381 ntBASIC2□□□□□ -2.09
SSSCA1O60232 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC1.99□□□□□ -2.09
SSSCA1O60232 AC138915.1-201ENST00000565427 1685 ntBASIC1.99□□□□□ -2.09
SSSCA1O60232 AL512283.1-201ENST00000606756 1384 ntBASIC1.99□□□□□ -2.09
SSSCA1O60232 AC005336.3-201ENST00000623833 2679 ntBASIC1.99□□□□□ -2.09
SSSCA1O60232 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
SSSCA1O60232 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
SSSCA1O60232 MIRLET7G-201ENST00000362280 84 ntBASIC1.99□□□□□ -2.09
SSSCA1O60232 Y_RNA.126-201ENST00000363382 111 ntBASIC1.99□□□□□ -2.09
SSSCA1O60232 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
SSSCA1O60232 SNORA41-201ENST00000384675 132 ntBASIC1.99□□□□□ -2.09
SSSCA1O60232 SNORA80E-201ENST00000384744 137 ntBASIC1.99□□□□□ -2.09
SSSCA1O60232 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
SSSCA1O60232 ARF4P3-201ENST00000397387 509 ntBASIC1.99□□□□□ -2.09
SSSCA1O60232 UBA52P6-201ENST00000399822 382 ntBASIC1.99□□□□□ -2.09
SSSCA1O60232 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC1.99□□□□□ -2.09
SSSCA1O60232 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC1.99□□□□□ -2.09
SSSCA1O60232 RPS24P8-201ENST00000431490 402 ntBASIC1.99□□□□□ -2.09
SSSCA1O60232 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC1.99□□□□□ -2.09
SSSCA1O60232 RPL34P26-201ENST00000445636 354 ntBASIC1.99□□□□□ -2.09
SSSCA1O60232 AL671855.1-201ENST00000446875 1203 ntBASIC1.99□□□□□ -2.09
SSSCA1O60232 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC1.99□□□□□ -2.09
SSSCA1O60232 AP001992.1-205ENST00000462248 379 ntBASIC1.99□□□□□ -2.09
SSSCA1O60232 AC017015.1-201ENST00000477387 286 ntBASIC1.99□□□□□ -2.09
SSSCA1O60232 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC1.99□□□□□ -2.09
SSSCA1O60232 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC1.99□□□□□ -2.09
SSSCA1O60232 AC010625.1-201ENST00000511296 403 ntBASIC1.99□□□□□ -2.09
SSSCA1O60232 SNORA31.1-201ENST00000515993 133 ntBASIC1.99□□□□□ -2.09
SSSCA1O60232 SNORA31.5-201ENST00000516190 133 ntBASIC1.99□□□□□ -2.09
SSSCA1O60232 RPPH1-2P-201ENST00000516688 293 ntBASIC1.99□□□□□ -2.09
SSSCA1O60232 AP003467.2-201ENST00000520175 319 ntBASIC1.99□□□□□ -2.09
SSSCA1O60232 IGHVIII-5-1-201ENST00000523059 99 ntBASIC1.99□□□□□ -2.09
SSSCA1O60232 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC1.99□□□□□ -2.09
SSSCA1O60232 AC019227.1-201ENST00000526902 510 ntBASIC1.99□□□□□ -2.09
SSSCA1O60232 OR4R1P-201ENST00000529879 463 ntBASIC1.99□□□□□ -2.09
SSSCA1O60232 AC022080.3-201ENST00000544433 482 ntBASIC1.99□□□□□ -2.09
SSSCA1O60232 CCNG2P1-201ENST00000549521 1000 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms