Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
H2afb1S4R1E0 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC14.91□□□□□ -0.02
H2afb1S4R1E0 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
H2afb1S4R1E0 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
H2afb1S4R1E0 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
H2afb1S4R1E0 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
H2afb1S4R1E0 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
H2afb1S4R1E0 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
H2afb1S4R1E0 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
H2afb1S4R1E0 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
H2afb1S4R1E0 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
H2afb1S4R1E0 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
H2afb1S4R1E0 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
H2afb1S4R1E0 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
H2afb1S4R1E0 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
H2afb1S4R1E0 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
H2afb1S4R1E0 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
H2afb1S4R1E0 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC14.9□□□□□ -0.02
H2afb1S4R1E0 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
H2afb1S4R1E0 Gm27000-201ENSMUST00000182943 842 ntBASIC14.9□□□□□ -0.02
H2afb1S4R1E0 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
H2afb1S4R1E0 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
H2afb1S4R1E0 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC14.9□□□□□ -0.02
H2afb1S4R1E0 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
H2afb1S4R1E0 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
H2afb1S4R1E0 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
H2afb1S4R1E0 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
H2afb1S4R1E0 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
H2afb1S4R1E0 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC14.9□□□□□ -0.02
H2afb1S4R1E0 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
H2afb1S4R1E0 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
H2afb1S4R1E0 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
H2afb1S4R1E0 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
H2afb1S4R1E0 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
H2afb1S4R1E0 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
H2afb1S4R1E0 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
H2afb1S4R1E0 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
H2afb1S4R1E0 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
H2afb1S4R1E0 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
H2afb1S4R1E0 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
H2afb1S4R1E0 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
H2afb1S4R1E0 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
H2afb1S4R1E0 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
H2afb1S4R1E0 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
H2afb1S4R1E0 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
H2afb1S4R1E0 Gm29257-201ENSMUST00000186115 639 ntBASIC14.89□□□□□ -0.03
H2afb1S4R1E0 AC175538.1-201ENSMUST00000225343 1269 ntBASIC14.89□□□□□ -0.03
H2afb1S4R1E0 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC14.89□□□□□ -0.03
H2afb1S4R1E0 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC14.89□□□□□ -0.03
H2afb1S4R1E0 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
H2afb1S4R1E0 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
H2afb1S4R1E0 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
H2afb1S4R1E0 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
H2afb1S4R1E0 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
H2afb1S4R1E0 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
H2afb1S4R1E0 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
H2afb1S4R1E0 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
H2afb1S4R1E0 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
H2afb1S4R1E0 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
H2afb1S4R1E0 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
H2afb1S4R1E0 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
H2afb1S4R1E0 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
H2afb1S4R1E0 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
H2afb1S4R1E0 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
H2afb1S4R1E0 Gm8520-201ENSMUST00000186517 868 ntBASIC14.88□□□□□ -0.03
H2afb1S4R1E0 Gm16042-201ENSMUST00000204813 1247 ntBASIC14.88□□□□□ -0.03
H2afb1S4R1E0 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC14.88□□□□□ -0.03
H2afb1S4R1E0 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
H2afb1S4R1E0 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
H2afb1S4R1E0 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
H2afb1S4R1E0 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
H2afb1S4R1E0 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
H2afb1S4R1E0 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
H2afb1S4R1E0 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
H2afb1S4R1E0 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
H2afb1S4R1E0 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
H2afb1S4R1E0 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC14.88□□□□□ -0.03
H2afb1S4R1E0 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC14.87□□□□□ -0.03
H2afb1S4R1E0 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
H2afb1S4R1E0 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
H2afb1S4R1E0 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC14.87□□□□□ -0.03
H2afb1S4R1E0 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
H2afb1S4R1E0 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
H2afb1S4R1E0 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
H2afb1S4R1E0 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
H2afb1S4R1E0 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
H2afb1S4R1E0 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
H2afb1S4R1E0 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
H2afb1S4R1E0 Gm12669-201ENSMUST00000122162 1009 ntBASIC14.87□□□□□ -0.03
H2afb1S4R1E0 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
H2afb1S4R1E0 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
H2afb1S4R1E0 AC156016.1-201ENSMUST00000227190 1035 ntBASIC14.87□□□□□ -0.03
H2afb1S4R1E0 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
H2afb1S4R1E0 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
H2afb1S4R1E0 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
H2afb1S4R1E0 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
H2afb1S4R1E0 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
H2afb1S4R1E0 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
H2afb1S4R1E0 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
H2afb1S4R1E0 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms