Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smarcb1Q9Z0H3 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC16.98■□□□□ 0.31
Smarcb1Q9Z0H3 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
Smarcb1Q9Z0H3 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
Smarcb1Q9Z0H3 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smarcb1Q9Z0H3 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smarcb1Q9Z0H3 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Smarcb1Q9Z0H3 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smarcb1Q9Z0H3 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smarcb1Q9Z0H3 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC16.98■□□□□ 0.31
Smarcb1Q9Z0H3 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Smarcb1Q9Z0H3 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Smarcb1Q9Z0H3 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smarcb1Q9Z0H3 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Smarcb1Q9Z0H3 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Smarcb1Q9Z0H3 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smarcb1Q9Z0H3 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
Smarcb1Q9Z0H3 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smarcb1Q9Z0H3 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Smarcb1Q9Z0H3 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smarcb1Q9Z0H3 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Smarcb1Q9Z0H3 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smarcb1Q9Z0H3 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smarcb1Q9Z0H3 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC16.97■□□□□ 0.31
Smarcb1Q9Z0H3 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smarcb1Q9Z0H3 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC16.97■□□□□ 0.31
Smarcb1Q9Z0H3 Cmtm5-203ENSMUST00000227441 610 ntBASIC16.97■□□□□ 0.31
Smarcb1Q9Z0H3 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smarcb1Q9Z0H3 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smarcb1Q9Z0H3 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smarcb1Q9Z0H3 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Smarcb1Q9Z0H3 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Smarcb1Q9Z0H3 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smarcb1Q9Z0H3 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smarcb1Q9Z0H3 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smarcb1Q9Z0H3 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smarcb1Q9Z0H3 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smarcb1Q9Z0H3 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Smarcb1Q9Z0H3 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
Smarcb1Q9Z0H3 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Smarcb1Q9Z0H3 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Smarcb1Q9Z0H3 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Smarcb1Q9Z0H3 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC16.96■□□□□ 0.31
Smarcb1Q9Z0H3 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Smarcb1Q9Z0H3 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Smarcb1Q9Z0H3 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
Smarcb1Q9Z0H3 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC16.96■□□□□ 0.31
Smarcb1Q9Z0H3 AC133598.3-202ENSMUST00000224219 531 ntBASIC16.96■□□□□ 0.31
Smarcb1Q9Z0H3 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Smarcb1Q9Z0H3 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Smarcb1Q9Z0H3 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Smarcb1Q9Z0H3 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Smarcb1Q9Z0H3 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Smarcb1Q9Z0H3 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Smarcb1Q9Z0H3 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Smarcb1Q9Z0H3 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Smarcb1Q9Z0H3 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Smarcb1Q9Z0H3 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Smarcb1Q9Z0H3 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Smarcb1Q9Z0H3 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Smarcb1Q9Z0H3 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Smarcb1Q9Z0H3 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Smarcb1Q9Z0H3 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Smarcb1Q9Z0H3 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Smarcb1Q9Z0H3 AC160338.1-201ENSMUST00000214232 705 ntBASIC16.95■□□□□ 0.3
Smarcb1Q9Z0H3 Rbfox2-207ENSMUST00000227533 1041 ntBASIC16.95■□□□□ 0.3
Smarcb1Q9Z0H3 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Smarcb1Q9Z0H3 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Smarcb1Q9Z0H3 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Smarcb1Q9Z0H3 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Smarcb1Q9Z0H3 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Smarcb1Q9Z0H3 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC16.95■□□□□ 0.3
Smarcb1Q9Z0H3 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Smarcb1Q9Z0H3 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Smarcb1Q9Z0H3 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Smarcb1Q9Z0H3 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Smarcb1Q9Z0H3 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Smarcb1Q9Z0H3 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Smarcb1Q9Z0H3 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Smarcb1Q9Z0H3 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Smarcb1Q9Z0H3 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Smarcb1Q9Z0H3 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Smarcb1Q9Z0H3 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smarcb1Q9Z0H3 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smarcb1Q9Z0H3 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Smarcb1Q9Z0H3 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Smarcb1Q9Z0H3 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC16.94■□□□□ 0.3
Smarcb1Q9Z0H3 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smarcb1Q9Z0H3 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC16.94■□□□□ 0.3
Smarcb1Q9Z0H3 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC16.94■□□□□ 0.3
Smarcb1Q9Z0H3 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Smarcb1Q9Z0H3 Gm25745-201ENSMUST00000174945 133 ntBASIC16.94■□□□□ 0.3
Smarcb1Q9Z0H3 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC16.94■□□□□ 0.3
Smarcb1Q9Z0H3 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smarcb1Q9Z0H3 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Smarcb1Q9Z0H3 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smarcb1Q9Z0H3 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smarcb1Q9Z0H3 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smarcb1Q9Z0H3 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smarcb1Q9Z0H3 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms