Protein–RNA interactions for Protein: Q9QUM7

Msh5, MutS protein homolog 5, mousemouse

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh5Q9QUM7 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Msh5Q9QUM7 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC16.8■□□□□ 0.28
Msh5Q9QUM7 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Msh5Q9QUM7 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC16.8■□□□□ 0.28
Msh5Q9QUM7 Gm6991-201ENSMUST00000218475 1178 ntBASIC16.8■□□□□ 0.28
Msh5Q9QUM7 Gm7791-201ENSMUST00000219066 539 ntBASIC16.8■□□□□ 0.28
Msh5Q9QUM7 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Msh5Q9QUM7 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
Msh5Q9QUM7 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
Msh5Q9QUM7 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Msh5Q9QUM7 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Msh5Q9QUM7 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Msh5Q9QUM7 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC16.8■□□□□ 0.28
Msh5Q9QUM7 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Msh5Q9QUM7 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Msh5Q9QUM7 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Msh5Q9QUM7 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Msh5Q9QUM7 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Msh5Q9QUM7 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Msh5Q9QUM7 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Msh5Q9QUM7 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Msh5Q9QUM7 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Msh5Q9QUM7 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC16.79■□□□□ 0.28
Msh5Q9QUM7 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Msh5Q9QUM7 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Msh5Q9QUM7 Gm36943-201ENSMUST00000194422 282 ntBASIC16.79■□□□□ 0.28
Msh5Q9QUM7 Gm10271-201ENSMUST00000092165 156 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Msh5Q9QUM7 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC16.79■□□□□ 0.28
Msh5Q9QUM7 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC16.79■□□□□ 0.28
Msh5Q9QUM7 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC16.79■□□□□ 0.28
Msh5Q9QUM7 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Msh5Q9QUM7 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Msh5Q9QUM7 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC16.79■□□□□ 0.28
Msh5Q9QUM7 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Msh5Q9QUM7 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC16.79■□□□□ 0.28
Msh5Q9QUM7 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Msh5Q9QUM7 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Msh5Q9QUM7 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Msh5Q9QUM7 Ncmap-201ENSMUST00000064481 1448 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
Msh5Q9QUM7 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Msh5Q9QUM7 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Msh5Q9QUM7 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Msh5Q9QUM7 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
Msh5Q9QUM7 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Msh5Q9QUM7 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC16.78■□□□□ 0.28
Msh5Q9QUM7 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Msh5Q9QUM7 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
Msh5Q9QUM7 Gm14716-201ENSMUST00000120138 718 ntBASIC16.78■□□□□ 0.28
Msh5Q9QUM7 Gm27463-201ENSMUST00000183569 57 ntBASIC16.78■□□□□ 0.28
Msh5Q9QUM7 Gm43353-201ENSMUST00000199224 1295 ntBASIC16.78■□□□□ 0.28
Msh5Q9QUM7 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC16.78■□□□□ 0.28
Msh5Q9QUM7 AC120002.2-201ENSMUST00000220205 773 ntBASIC16.78■□□□□ 0.28
Msh5Q9QUM7 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Msh5Q9QUM7 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Msh5Q9QUM7 Gemin6-201ENSMUST00000069486 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Msh5Q9QUM7 Vmn1r34-201ENSMUST00000074381 930 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Msh5Q9QUM7 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC16.78■□□□□ 0.28
Msh5Q9QUM7 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Msh5Q9QUM7 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC16.78■□□□□ 0.28
Msh5Q9QUM7 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Msh5Q9QUM7 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Msh5Q9QUM7 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC16.78■□□□□ 0.28
Msh5Q9QUM7 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Msh5Q9QUM7 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Msh5Q9QUM7 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Msh5Q9QUM7 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Msh5Q9QUM7 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Msh5Q9QUM7 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Msh5Q9QUM7 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Msh5Q9QUM7 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Msh5Q9QUM7 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Msh5Q9QUM7 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Msh5Q9QUM7 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Msh5Q9QUM7 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Msh5Q9QUM7 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Msh5Q9QUM7 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC16.77■□□□□ 0.28
Msh5Q9QUM7 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Msh5Q9QUM7 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Msh5Q9QUM7 AC153912.1-201ENSMUST00000217011 724 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
Msh5Q9QUM7 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Msh5Q9QUM7 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Msh5Q9QUM7 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Msh5Q9QUM7 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC16.77■□□□□ 0.28
Msh5Q9QUM7 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Msh5Q9QUM7 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Msh5Q9QUM7 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Msh5Q9QUM7 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Msh5Q9QUM7 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Msh5Q9QUM7 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.27
Msh5Q9QUM7 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Msh5Q9QUM7 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC16.76■□□□□ 0.27
Msh5Q9QUM7 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Msh5Q9QUM7 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Msh5Q9QUM7 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Msh5Q9QUM7 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC16.76■□□□□ 0.27
Msh5Q9QUM7 Gm15565-201ENSMUST00000118890 427 ntBASIC16.76■□□□□ 0.27
Msh5Q9QUM7 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC16.76■□□□□ 0.27
Msh5Q9QUM7 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Msh5Q9QUM7 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC16.76■□□□□ 0.27
Msh5Q9QUM7 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC16.76■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms