Protein–RNA interactions for Protein: Q9JMB8

Cntn6, Contactin-6, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn6Q9JMB8 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cntn6Q9JMB8 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cntn6Q9JMB8 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cntn6Q9JMB8 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Cntn6Q9JMB8 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cntn6Q9JMB8 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cntn6Q9JMB8 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cntn6Q9JMB8 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cntn6Q9JMB8 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Cntn6Q9JMB8 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cntn6Q9JMB8 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cntn6Q9JMB8 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cntn6Q9JMB8 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cntn6Q9JMB8 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cntn6Q9JMB8 Gm9172-201ENSMUST00000212092 954 ntBASIC17.81■□□□□ 0.44
Cntn6Q9JMB8 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cntn6Q9JMB8 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Cntn6Q9JMB8 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cntn6Q9JMB8 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cntn6Q9JMB8 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Cntn6Q9JMB8 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cntn6Q9JMB8 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cntn6Q9JMB8 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cntn6Q9JMB8 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cntn6Q9JMB8 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC17.81■□□□□ 0.44
Cntn6Q9JMB8 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cntn6Q9JMB8 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Cntn6Q9JMB8 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cntn6Q9JMB8 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Cntn6Q9JMB8 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cntn6Q9JMB8 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC17.8■□□□□ 0.44
Cntn6Q9JMB8 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cntn6Q9JMB8 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC17.8■□□□□ 0.44
Cntn6Q9JMB8 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Cntn6Q9JMB8 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cntn6Q9JMB8 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Cntn6Q9JMB8 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cntn6Q9JMB8 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Cntn6Q9JMB8 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cntn6Q9JMB8 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cntn6Q9JMB8 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Cntn6Q9JMB8 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cntn6Q9JMB8 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cntn6Q9JMB8 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cntn6Q9JMB8 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Cntn6Q9JMB8 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Cntn6Q9JMB8 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cntn6Q9JMB8 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Cntn6Q9JMB8 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC17.79■□□□□ 0.44
Cntn6Q9JMB8 AC164629.2-201ENSMUST00000217916 270 ntBASIC17.79■□□□□ 0.44
Cntn6Q9JMB8 Cmtm5-203ENSMUST00000227441 610 ntBASIC17.79■□□□□ 0.44
Cntn6Q9JMB8 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cntn6Q9JMB8 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Cntn6Q9JMB8 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC17.79■□□□□ 0.44
Cntn6Q9JMB8 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.79■□□□□ 0.44
Cntn6Q9JMB8 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Cntn6Q9JMB8 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Cntn6Q9JMB8 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Cntn6Q9JMB8 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cntn6Q9JMB8 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Cntn6Q9JMB8 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cntn6Q9JMB8 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cntn6Q9JMB8 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Cntn6Q9JMB8 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cntn6Q9JMB8 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
Cntn6Q9JMB8 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Cntn6Q9JMB8 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Cntn6Q9JMB8 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC17.78■□□□□ 0.44
Cntn6Q9JMB8 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cntn6Q9JMB8 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cntn6Q9JMB8 Rbfox2-207ENSMUST00000227533 1041 ntBASIC17.78■□□□□ 0.44
Cntn6Q9JMB8 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Cntn6Q9JMB8 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Cntn6Q9JMB8 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cntn6Q9JMB8 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC17.78■□□□□ 0.44
Cntn6Q9JMB8 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cntn6Q9JMB8 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cntn6Q9JMB8 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC17.78■□□□□ 0.44
Cntn6Q9JMB8 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cntn6Q9JMB8 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Cntn6Q9JMB8 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cntn6Q9JMB8 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cntn6Q9JMB8 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Cntn6Q9JMB8 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Cntn6Q9JMB8 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cntn6Q9JMB8 Gm12497-201ENSMUST00000138778 237 ntBASIC17.77■□□□□ 0.44
Cntn6Q9JMB8 Gm44357-201ENSMUST00000195897 142 ntBASIC17.77■□□□□ 0.44
Cntn6Q9JMB8 Gm19658-201ENSMUST00000196231 138 ntBASIC17.77■□□□□ 0.44
Cntn6Q9JMB8 Gm44367-201ENSMUST00000196836 138 ntBASIC17.77■□□□□ 0.44
Cntn6Q9JMB8 Gm44350-201ENSMUST00000197197 138 ntBASIC17.77■□□□□ 0.44
Cntn6Q9JMB8 Gm44390-201ENSMUST00000197533 144 ntBASIC17.77■□□□□ 0.44
Cntn6Q9JMB8 Gm44313-201ENSMUST00000198018 138 ntBASIC17.77■□□□□ 0.44
Cntn6Q9JMB8 Gm44486-201ENSMUST00000198508 138 ntBASIC17.77■□□□□ 0.44
Cntn6Q9JMB8 Gm44314-201ENSMUST00000199263 138 ntBASIC17.77■□□□□ 0.44
Cntn6Q9JMB8 Gm44394-201ENSMUST00000199558 138 ntBASIC17.77■□□□□ 0.44
Cntn6Q9JMB8 Gm44484-201ENSMUST00000199873 138 ntBASIC17.77■□□□□ 0.44
Cntn6Q9JMB8 Gm44466-201ENSMUST00000200264 138 ntBASIC17.77■□□□□ 0.44
Cntn6Q9JMB8 Gm44359-201ENSMUST00000200671 138 ntBASIC17.77■□□□□ 0.44
Cntn6Q9JMB8 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC17.77■□□□□ 0.44
Cntn6Q9JMB8 Gm7506-201ENSMUST00000207758 815 ntBASIC17.77■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms