Protein–RNA interactions for Protein: Q9JL61

Rfx5, DNA-binding protein Rfx5, mousemouse

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx5Q9JL61 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC17.32■□□□□ 0.36
Rfx5Q9JL61 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rfx5Q9JL61 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rfx5Q9JL61 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rfx5Q9JL61 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Rfx5Q9JL61 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC17.32■□□□□ 0.36
Rfx5Q9JL61 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Rfx5Q9JL61 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rfx5Q9JL61 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rfx5Q9JL61 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rfx5Q9JL61 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rfx5Q9JL61 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rfx5Q9JL61 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Rfx5Q9JL61 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Rfx5Q9JL61 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC17.31■□□□□ 0.36
Rfx5Q9JL61 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC17.31■□□□□ 0.36
Rfx5Q9JL61 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Rfx5Q9JL61 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Rfx5Q9JL61 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC17.31■□□□□ 0.36
Rfx5Q9JL61 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
Rfx5Q9JL61 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rfx5Q9JL61 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rfx5Q9JL61 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rfx5Q9JL61 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rfx5Q9JL61 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rfx5Q9JL61 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rfx5Q9JL61 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rfx5Q9JL61 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Rfx5Q9JL61 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rfx5Q9JL61 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rfx5Q9JL61 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Rfx5Q9JL61 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rfx5Q9JL61 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Rfx5Q9JL61 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rfx5Q9JL61 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rfx5Q9JL61 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rfx5Q9JL61 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Rfx5Q9JL61 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Rfx5Q9JL61 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rfx5Q9JL61 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rfx5Q9JL61 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rfx5Q9JL61 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rfx5Q9JL61 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Rfx5Q9JL61 AC153794.1-201ENSMUST00000169148 126 ntBASIC17.3■□□□□ 0.36
Rfx5Q9JL61 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Rfx5Q9JL61 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rfx5Q9JL61 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Rfx5Q9JL61 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC17.3■□□□□ 0.36
Rfx5Q9JL61 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rfx5Q9JL61 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rfx5Q9JL61 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rfx5Q9JL61 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
Rfx5Q9JL61 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Rfx5Q9JL61 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rfx5Q9JL61 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC17.3■□□□□ 0.36
Rfx5Q9JL61 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Rfx5Q9JL61 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rfx5Q9JL61 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rfx5Q9JL61 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.29■□□□□ 0.36
Rfx5Q9JL61 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Rfx5Q9JL61 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rfx5Q9JL61 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rfx5Q9JL61 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rfx5Q9JL61 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rfx5Q9JL61 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC17.29■□□□□ 0.36
Rfx5Q9JL61 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rfx5Q9JL61 Gm13312-201ENSMUST00000119631 718 ntBASIC17.29■□□□□ 0.36
Rfx5Q9JL61 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rfx5Q9JL61 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rfx5Q9JL61 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rfx5Q9JL61 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rfx5Q9JL61 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rfx5Q9JL61 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rfx5Q9JL61 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rfx5Q9JL61 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rfx5Q9JL61 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC17.29■□□□□ 0.36
Rfx5Q9JL61 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Rfx5Q9JL61 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rfx5Q9JL61 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rfx5Q9JL61 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rfx5Q9JL61 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rfx5Q9JL61 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rfx5Q9JL61 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rfx5Q9JL61 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rfx5Q9JL61 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rfx5Q9JL61 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rfx5Q9JL61 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rfx5Q9JL61 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rfx5Q9JL61 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rfx5Q9JL61 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC17.28■□□□□ 0.36
Rfx5Q9JL61 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rfx5Q9JL61 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC17.28■□□□□ 0.36
Rfx5Q9JL61 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC17.28■□□□□ 0.36
Rfx5Q9JL61 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
Rfx5Q9JL61 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Rfx5Q9JL61 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC17.28■□□□□ 0.36
Rfx5Q9JL61 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rfx5Q9JL61 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
Rfx5Q9JL61 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rfx5Q9JL61 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms