Protein–RNA interactions for Protein: Q9EQH3

Vps35, Vacuolar protein sorting-associated protein 35, mousemouse

Known RBP Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35Q9EQH3 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Vps35Q9EQH3 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Vps35Q9EQH3 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Vps35Q9EQH3 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Vps35Q9EQH3 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Vps35Q9EQH3 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
Vps35Q9EQH3 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Vps35Q9EQH3 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Vps35Q9EQH3 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Vps35Q9EQH3 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Vps35Q9EQH3 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Vps35Q9EQH3 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Vps35Q9EQH3 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC16.44■□□□□ 0.22
Vps35Q9EQH3 Gm37722-201ENSMUST00000193757 208 ntBASIC16.44■□□□□ 0.22
Vps35Q9EQH3 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Vps35Q9EQH3 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Vps35Q9EQH3 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Vps35Q9EQH3 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Vps35Q9EQH3 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Vps35Q9EQH3 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Vps35Q9EQH3 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Vps35Q9EQH3 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC16.44■□□□□ 0.22
Vps35Q9EQH3 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Vps35Q9EQH3 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Vps35Q9EQH3 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Vps35Q9EQH3 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Vps35Q9EQH3 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Vps35Q9EQH3 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Vps35Q9EQH3 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Vps35Q9EQH3 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Vps35Q9EQH3 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Vps35Q9EQH3 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Vps35Q9EQH3 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Vps35Q9EQH3 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Vps35Q9EQH3 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Vps35Q9EQH3 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Vps35Q9EQH3 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Vps35Q9EQH3 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Vps35Q9EQH3 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Vps35Q9EQH3 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Vps35Q9EQH3 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Vps35Q9EQH3 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Vps35Q9EQH3 Gm11336-201ENSMUST00000118168 334 ntBASIC16.43■□□□□ 0.22
Vps35Q9EQH3 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Vps35Q9EQH3 AA414768-201ENSMUST00000121924 1257 ntBASIC16.43■□□□□ 0.22
Vps35Q9EQH3 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Vps35Q9EQH3 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC16.43■□□□□ 0.22
Vps35Q9EQH3 Gm6728-201ENSMUST00000178117 1065 ntBASIC16.43■□□□□ 0.22
Vps35Q9EQH3 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Vps35Q9EQH3 Gm44450-201ENSMUST00000199528 114 ntBASIC16.43■□□□□ 0.22
Vps35Q9EQH3 Gm5587-201ENSMUST00000206270 674 ntBASIC16.43■□□□□ 0.22
Vps35Q9EQH3 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
Vps35Q9EQH3 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Vps35Q9EQH3 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Vps35Q9EQH3 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Vps35Q9EQH3 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Vps35Q9EQH3 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Vps35Q9EQH3 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Vps35Q9EQH3 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Vps35Q9EQH3 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Vps35Q9EQH3 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC16.43■□□□□ 0.22
Vps35Q9EQH3 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Vps35Q9EQH3 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Vps35Q9EQH3 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Vps35Q9EQH3 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
Vps35Q9EQH3 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Vps35Q9EQH3 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Vps35Q9EQH3 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
Vps35Q9EQH3 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC16.43■□□□□ 0.22
Vps35Q9EQH3 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Vps35Q9EQH3 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Vps35Q9EQH3 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC16.42■□□□□ 0.22
Vps35Q9EQH3 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Vps35Q9EQH3 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Vps35Q9EQH3 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Vps35Q9EQH3 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Vps35Q9EQH3 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Vps35Q9EQH3 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Vps35Q9EQH3 Gm25016-201ENSMUST00000158399 131 ntBASIC16.42■□□□□ 0.22
Vps35Q9EQH3 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Vps35Q9EQH3 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Vps35Q9EQH3 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Vps35Q9EQH3 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Vps35Q9EQH3 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Vps35Q9EQH3 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vps35Q9EQH3 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Vps35Q9EQH3 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vps35Q9EQH3 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vps35Q9EQH3 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Vps35Q9EQH3 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vps35Q9EQH3 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC16.41■□□□□ 0.22
Vps35Q9EQH3 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Vps35Q9EQH3 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vps35Q9EQH3 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Vps35Q9EQH3 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vps35Q9EQH3 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Vps35Q9EQH3 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC16.41■□□□□ 0.22
Vps35Q9EQH3 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC16.41■□□□□ 0.22
Vps35Q9EQH3 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vps35Q9EQH3 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms