Protein–RNA interactions for Protein: Q9EQG9

Col4a3bp, Collagen type IV alpha-3-binding protein, mousemouse

Predictions only

Length 624 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a3bpQ9EQG9 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Col4a3bpQ9EQG9 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col4a3bpQ9EQG9 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Col4a3bpQ9EQG9 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col4a3bpQ9EQG9 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col4a3bpQ9EQG9 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col4a3bpQ9EQG9 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col4a3bpQ9EQG9 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC18.81■□□□□ 0.6
Col4a3bpQ9EQG9 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col4a3bpQ9EQG9 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Col4a3bpQ9EQG9 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC18.81■□□□□ 0.6
Col4a3bpQ9EQG9 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Col4a3bpQ9EQG9 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Col4a3bpQ9EQG9 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC18.81■□□□□ 0.6
Col4a3bpQ9EQG9 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col4a3bpQ9EQG9 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col4a3bpQ9EQG9 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col4a3bpQ9EQG9 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col4a3bpQ9EQG9 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col4a3bpQ9EQG9 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Col4a3bpQ9EQG9 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Col4a3bpQ9EQG9 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Col4a3bpQ9EQG9 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col4a3bpQ9EQG9 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Col4a3bpQ9EQG9 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Col4a3bpQ9EQG9 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Col4a3bpQ9EQG9 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Col4a3bpQ9EQG9 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Col4a3bpQ9EQG9 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Col4a3bpQ9EQG9 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Col4a3bpQ9EQG9 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Col4a3bpQ9EQG9 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Col4a3bpQ9EQG9 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Col4a3bpQ9EQG9 AC130671.1-201ENSMUST00000227384 1237 ntBASIC18.8■□□□□ 0.6
Col4a3bpQ9EQG9 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC18.8■□□□□ 0.6
Col4a3bpQ9EQG9 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC18.8■□□□□ 0.6
Col4a3bpQ9EQG9 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Col4a3bpQ9EQG9 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC18.8■□□□□ 0.6
Col4a3bpQ9EQG9 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Col4a3bpQ9EQG9 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC18.8■□□□□ 0.6
Col4a3bpQ9EQG9 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Col4a3bpQ9EQG9 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Col4a3bpQ9EQG9 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Col4a3bpQ9EQG9 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Col4a3bpQ9EQG9 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Col4a3bpQ9EQG9 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Col4a3bpQ9EQG9 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Col4a3bpQ9EQG9 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Col4a3bpQ9EQG9 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Col4a3bpQ9EQG9 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC18.79■□□□□ 0.6
Col4a3bpQ9EQG9 Gm22697-201ENSMUST00000175194 63 ntBASIC18.79■□□□□ 0.6
Col4a3bpQ9EQG9 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Col4a3bpQ9EQG9 Gm18101-201ENSMUST00000215769 548 ntBASIC18.79■□□□□ 0.6
Col4a3bpQ9EQG9 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Col4a3bpQ9EQG9 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Col4a3bpQ9EQG9 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC18.79■□□□□ 0.6
Col4a3bpQ9EQG9 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC18.79■□□□□ 0.6
Col4a3bpQ9EQG9 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Col4a3bpQ9EQG9 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Col4a3bpQ9EQG9 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Col4a3bpQ9EQG9 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Col4a3bpQ9EQG9 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Col4a3bpQ9EQG9 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Col4a3bpQ9EQG9 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC18.79■□□□□ 0.6
Col4a3bpQ9EQG9 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Col4a3bpQ9EQG9 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Col4a3bpQ9EQG9 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Col4a3bpQ9EQG9 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC18.78■□□□□ 0.6
Col4a3bpQ9EQG9 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Col4a3bpQ9EQG9 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Col4a3bpQ9EQG9 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Col4a3bpQ9EQG9 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Col4a3bpQ9EQG9 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Col4a3bpQ9EQG9 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Col4a3bpQ9EQG9 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Col4a3bpQ9EQG9 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Col4a3bpQ9EQG9 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC18.78■□□□□ 0.6
Col4a3bpQ9EQG9 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Col4a3bpQ9EQG9 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC18.78■□□□□ 0.6
Col4a3bpQ9EQG9 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Col4a3bpQ9EQG9 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Col4a3bpQ9EQG9 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Col4a3bpQ9EQG9 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Col4a3bpQ9EQG9 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Col4a3bpQ9EQG9 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Col4a3bpQ9EQG9 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Col4a3bpQ9EQG9 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Col4a3bpQ9EQG9 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Col4a3bpQ9EQG9 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC18.77■□□□□ 0.6
Col4a3bpQ9EQG9 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Col4a3bpQ9EQG9 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Col4a3bpQ9EQG9 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Col4a3bpQ9EQG9 Gm18115-201ENSMUST00000221209 621 ntBASIC18.77■□□□□ 0.6
Col4a3bpQ9EQG9 AC159205.3-201ENSMUST00000224614 874 ntBASIC18.77■□□□□ 0.6
Col4a3bpQ9EQG9 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
Col4a3bpQ9EQG9 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Col4a3bpQ9EQG9 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Col4a3bpQ9EQG9 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Col4a3bpQ9EQG9 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Col4a3bpQ9EQG9 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms