Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Mir770-201ENSMUST00000103252 94 ntBASIC17.14■□□□□ 0.33
Chmp2aQ9DB34 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Chmp2aQ9DB34 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Chmp2aQ9DB34 Gm11860-201ENSMUST00000122346 1010 ntBASIC17.14■□□□□ 0.33
Chmp2aQ9DB34 Gm9013-201ENSMUST00000132939 882 ntBASIC17.14■□□□□ 0.33
Chmp2aQ9DB34 Gm6345-202ENSMUST00000180900 204 ntBASIC17.14■□□□□ 0.33
Chmp2aQ9DB34 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Chmp2aQ9DB34 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Chmp2aQ9DB34 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Chmp2aQ9DB34 Gm26596-201ENSMUST00000180464 2655 ntBASIC17.14■□□□□ 0.33
Chmp2aQ9DB34 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Chmp2aQ9DB34 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Chmp2aQ9DB34 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Chmp2aQ9DB34 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Chmp2aQ9DB34 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Chmp2aQ9DB34 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Chmp2aQ9DB34 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC17.13■□□□□ 0.33
Chmp2aQ9DB34 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Chmp2aQ9DB34 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Chmp2aQ9DB34 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Chmp2aQ9DB34 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Chmp2aQ9DB34 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Chmp2aQ9DB34 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Chmp2aQ9DB34 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC17.13■□□□□ 0.33
Chmp2aQ9DB34 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Chmp2aQ9DB34 Gm25016-201ENSMUST00000158399 131 ntBASIC17.13■□□□□ 0.33
Chmp2aQ9DB34 Gm6623-201ENSMUST00000173570 544 ntBASIC17.13■□□□□ 0.33
Chmp2aQ9DB34 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC17.13■□□□□ 0.33
Chmp2aQ9DB34 Gm44450-201ENSMUST00000199528 114 ntBASIC17.13■□□□□ 0.33
Chmp2aQ9DB34 Gm5587-201ENSMUST00000206270 674 ntBASIC17.13■□□□□ 0.33
Chmp2aQ9DB34 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC17.13■□□□□ 0.33
Chmp2aQ9DB34 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Chmp2aQ9DB34 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Chmp2aQ9DB34 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Chmp2aQ9DB34 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Chmp2aQ9DB34 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Chmp2aQ9DB34 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Chmp2aQ9DB34 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Chmp2aQ9DB34 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Chmp2aQ9DB34 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Chmp2aQ9DB34 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chmp2aQ9DB34 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chmp2aQ9DB34 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chmp2aQ9DB34 Cxcl14-202ENSMUST00000224801 1467 ntBASIC17.12■□□□□ 0.33
Chmp2aQ9DB34 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Chmp2aQ9DB34 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Chmp2aQ9DB34 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Chmp2aQ9DB34 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chmp2aQ9DB34 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Chmp2aQ9DB34 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chmp2aQ9DB34 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC17.12■□□□□ 0.33
Chmp2aQ9DB34 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chmp2aQ9DB34 Gm18421-201ENSMUST00000204122 625 ntBASIC17.12■□□□□ 0.33
Chmp2aQ9DB34 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Chmp2aQ9DB34 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC17.12■□□□□ 0.33
Chmp2aQ9DB34 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chmp2aQ9DB34 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Chmp2aQ9DB34 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chmp2aQ9DB34 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Chmp2aQ9DB34 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chmp2aQ9DB34 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chmp2aQ9DB34 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.12■□□□□ 0.33
Chmp2aQ9DB34 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chmp2aQ9DB34 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Chmp2aQ9DB34 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chmp2aQ9DB34 Zfp264-201ENSMUST00000208656 1563 ntBASIC17.11■□□□□ 0.33
Chmp2aQ9DB34 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chmp2aQ9DB34 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chmp2aQ9DB34 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chmp2aQ9DB34 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chmp2aQ9DB34 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chmp2aQ9DB34 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chmp2aQ9DB34 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chmp2aQ9DB34 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chmp2aQ9DB34 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Chmp2aQ9DB34 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chmp2aQ9DB34 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC17.11■□□□□ 0.33
Chmp2aQ9DB34 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Chmp2aQ9DB34 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC17.11■□□□□ 0.33
Chmp2aQ9DB34 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chmp2aQ9DB34 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chmp2aQ9DB34 AC130671.1-201ENSMUST00000227384 1237 ntBASIC17.11■□□□□ 0.33
Chmp2aQ9DB34 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chmp2aQ9DB34 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chmp2aQ9DB34 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chmp2aQ9DB34 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chmp2aQ9DB34 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Chmp2aQ9DB34 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Chmp2aQ9DB34 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Chmp2aQ9DB34 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chmp2aQ9DB34 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC17.1■□□□□ 0.33
Chmp2aQ9DB34 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chmp2aQ9DB34 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chmp2aQ9DB34 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chmp2aQ9DB34 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chmp2aQ9DB34 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chmp2aQ9DB34 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
Chmp2aQ9DB34 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chmp2aQ9DB34 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chmp2aQ9DB34 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms