Protein–RNA interactions for Protein: Q9D5J6

Shpk, Sedoheptulokinase, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShpkQ9D5J6 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
ShpkQ9D5J6 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
ShpkQ9D5J6 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
ShpkQ9D5J6 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
ShpkQ9D5J6 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
ShpkQ9D5J6 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
ShpkQ9D5J6 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
ShpkQ9D5J6 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
ShpkQ9D5J6 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
ShpkQ9D5J6 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
ShpkQ9D5J6 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
ShpkQ9D5J6 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
ShpkQ9D5J6 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
ShpkQ9D5J6 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
ShpkQ9D5J6 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
ShpkQ9D5J6 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
ShpkQ9D5J6 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
ShpkQ9D5J6 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
ShpkQ9D5J6 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
ShpkQ9D5J6 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
ShpkQ9D5J6 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
ShpkQ9D5J6 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
ShpkQ9D5J6 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC13.77□□□□□ -0.21
ShpkQ9D5J6 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
ShpkQ9D5J6 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
ShpkQ9D5J6 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC13.76□□□□□ -0.21
ShpkQ9D5J6 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ShpkQ9D5J6 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ShpkQ9D5J6 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ShpkQ9D5J6 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
ShpkQ9D5J6 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
ShpkQ9D5J6 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
ShpkQ9D5J6 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
ShpkQ9D5J6 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
ShpkQ9D5J6 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
ShpkQ9D5J6 AC140930.3-201ENSMUST00000222935 274 ntBASIC13.76□□□□□ -0.21
ShpkQ9D5J6 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
ShpkQ9D5J6 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ShpkQ9D5J6 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
ShpkQ9D5J6 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ShpkQ9D5J6 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ShpkQ9D5J6 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ShpkQ9D5J6 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
ShpkQ9D5J6 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ShpkQ9D5J6 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
ShpkQ9D5J6 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
ShpkQ9D5J6 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
ShpkQ9D5J6 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ShpkQ9D5J6 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ShpkQ9D5J6 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ShpkQ9D5J6 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ShpkQ9D5J6 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
ShpkQ9D5J6 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
ShpkQ9D5J6 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ShpkQ9D5J6 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
ShpkQ9D5J6 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ShpkQ9D5J6 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ShpkQ9D5J6 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
ShpkQ9D5J6 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
ShpkQ9D5J6 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
ShpkQ9D5J6 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
ShpkQ9D5J6 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ShpkQ9D5J6 Cdc34b-202ENSMUST00000188741 1252 ntBASIC13.75□□□□□ -0.21
ShpkQ9D5J6 Gm6420-201ENSMUST00000193885 723 ntBASIC13.75□□□□□ -0.21
ShpkQ9D5J6 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ShpkQ9D5J6 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
ShpkQ9D5J6 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
ShpkQ9D5J6 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ShpkQ9D5J6 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
ShpkQ9D5J6 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ShpkQ9D5J6 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
ShpkQ9D5J6 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ShpkQ9D5J6 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
ShpkQ9D5J6 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC13.74□□□□□ -0.21
ShpkQ9D5J6 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ShpkQ9D5J6 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
ShpkQ9D5J6 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ShpkQ9D5J6 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ShpkQ9D5J6 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ShpkQ9D5J6 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
ShpkQ9D5J6 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
ShpkQ9D5J6 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ShpkQ9D5J6 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
ShpkQ9D5J6 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ShpkQ9D5J6 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
ShpkQ9D5J6 Gm11643-201ENSMUST00000119578 864 ntBASIC13.74□□□□□ -0.21
ShpkQ9D5J6 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
ShpkQ9D5J6 Nespas-201ENSMUST00000143738 1083 ntBASIC13.74□□□□□ -0.21
ShpkQ9D5J6 Gm29241-201ENSMUST00000189260 1096 ntBASIC13.74□□□□□ -0.21
ShpkQ9D5J6 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ShpkQ9D5J6 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC13.74□□□□□ -0.21
ShpkQ9D5J6 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
ShpkQ9D5J6 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ShpkQ9D5J6 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
ShpkQ9D5J6 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ShpkQ9D5J6 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ShpkQ9D5J6 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ShpkQ9D5J6 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ShpkQ9D5J6 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ShpkQ9D5J6 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms