Protein–RNA interactions for Protein: Q9D3S3

Snx29, Sorting nexin-29, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx29Q9D3S3 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Snx29Q9D3S3 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Snx29Q9D3S3 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Snx29Q9D3S3 Gm11779-201ENSMUST00000118541 368 ntBASIC17.99■□□□□ 0.47
Snx29Q9D3S3 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
Snx29Q9D3S3 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Snx29Q9D3S3 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Snx29Q9D3S3 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Snx29Q9D3S3 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Snx29Q9D3S3 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Snx29Q9D3S3 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Snx29Q9D3S3 Gm37500-201ENSMUST00000192059 1443 ntBASIC17.98■□□□□ 0.47
Snx29Q9D3S3 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Snx29Q9D3S3 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC17.98■□□□□ 0.47
Snx29Q9D3S3 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC17.98■□□□□ 0.47
Snx29Q9D3S3 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC17.98■□□□□ 0.47
Snx29Q9D3S3 Mir6404-201ENSMUST00000183699 94 ntBASIC17.98■□□□□ 0.47
Snx29Q9D3S3 Gm5264-201ENSMUST00000190584 848 ntBASIC17.98■□□□□ 0.47
Snx29Q9D3S3 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Snx29Q9D3S3 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Snx29Q9D3S3 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Snx29Q9D3S3 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Snx29Q9D3S3 Gm15590-201ENSMUST00000078419 552 ntBASIC17.98■□□□□ 0.47
Snx29Q9D3S3 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Snx29Q9D3S3 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Snx29Q9D3S3 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Snx29Q9D3S3 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC17.98■□□□□ 0.47
Snx29Q9D3S3 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC17.98■□□□□ 0.47
Snx29Q9D3S3 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Snx29Q9D3S3 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Snx29Q9D3S3 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Snx29Q9D3S3 AC132265.1-201ENSMUST00000219233 1665 ntBASIC17.97■□□□□ 0.47
Snx29Q9D3S3 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Snx29Q9D3S3 Gm6858-201ENSMUST00000208582 1468 ntBASIC17.97■□□□□ 0.47
Snx29Q9D3S3 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Snx29Q9D3S3 Gm15467-201ENSMUST00000120582 445 ntBASIC17.97■□□□□ 0.47
Snx29Q9D3S3 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Snx29Q9D3S3 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Snx29Q9D3S3 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC17.97■□□□□ 0.47
Snx29Q9D3S3 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Snx29Q9D3S3 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Snx29Q9D3S3 AC159093.1-201ENSMUST00000227779 380 ntBASIC17.97■□□□□ 0.47
Snx29Q9D3S3 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Snx29Q9D3S3 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Snx29Q9D3S3 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Snx29Q9D3S3 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Snx29Q9D3S3 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.97■□□□□ 0.47
Snx29Q9D3S3 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Snx29Q9D3S3 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Snx29Q9D3S3 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC17.96■□□□□ 0.47
Snx29Q9D3S3 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Snx29Q9D3S3 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Snx29Q9D3S3 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Snx29Q9D3S3 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Snx29Q9D3S3 Gm7222-201ENSMUST00000117512 906 ntBASIC17.96■□□□□ 0.47
Snx29Q9D3S3 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC17.96■□□□□ 0.47
Snx29Q9D3S3 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Snx29Q9D3S3 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC17.96■□□□□ 0.47
Snx29Q9D3S3 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Snx29Q9D3S3 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC17.96■□□□□ 0.47
Snx29Q9D3S3 Gm2213-201ENSMUST00000197485 688 ntBASIC17.96■□□□□ 0.47
Snx29Q9D3S3 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC17.96■□□□□ 0.47
Snx29Q9D3S3 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Snx29Q9D3S3 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Snx29Q9D3S3 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Snx29Q9D3S3 Gm3928-201ENSMUST00000121141 1307 ntBASIC17.96■□□□□ 0.46
Snx29Q9D3S3 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.46
Snx29Q9D3S3 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Snx29Q9D3S3 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Snx29Q9D3S3 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Snx29Q9D3S3 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Snx29Q9D3S3 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Snx29Q9D3S3 Gm11594-201ENSMUST00000122313 162 ntBASIC17.95■□□□□ 0.46
Snx29Q9D3S3 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC17.95■□□□□ 0.46
Snx29Q9D3S3 AC154222.1-201ENSMUST00000223882 475 ntBASIC17.95■□□□□ 0.46
Snx29Q9D3S3 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Snx29Q9D3S3 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Snx29Q9D3S3 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Snx29Q9D3S3 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Snx29Q9D3S3 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Snx29Q9D3S3 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Snx29Q9D3S3 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Snx29Q9D3S3 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.94■□□□□ 0.46
Snx29Q9D3S3 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Snx29Q9D3S3 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
Snx29Q9D3S3 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Snx29Q9D3S3 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Snx29Q9D3S3 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC17.94■□□□□ 0.46
Snx29Q9D3S3 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Snx29Q9D3S3 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Snx29Q9D3S3 Gm13036-201ENSMUST00000117799 748 ntBASIC17.94■□□□□ 0.46
Snx29Q9D3S3 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC17.94■□□□□ 0.46
Snx29Q9D3S3 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Snx29Q9D3S3 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC17.94■□□□□ 0.46
Snx29Q9D3S3 Gm43935-201ENSMUST00000203569 1050 ntBASIC17.94■□□□□ 0.46
Snx29Q9D3S3 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Snx29Q9D3S3 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Snx29Q9D3S3 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Snx29Q9D3S3 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Snx29Q9D3S3 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 70.3 ms