Protein–RNA interactions for Protein: Q9D2N9

Vps33a, Vacuolar protein sorting-associated protein 33A, mousemouse

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps33aQ9D2N9 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC17.46■□□□□ 0.39
Vps33aQ9D2N9 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Vps33aQ9D2N9 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Vps33aQ9D2N9 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Vps33aQ9D2N9 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC17.46■□□□□ 0.39
Vps33aQ9D2N9 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Vps33aQ9D2N9 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC17.46■□□□□ 0.39
Vps33aQ9D2N9 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Vps33aQ9D2N9 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Vps33aQ9D2N9 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Vps33aQ9D2N9 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Vps33aQ9D2N9 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Vps33aQ9D2N9 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Vps33aQ9D2N9 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Vps33aQ9D2N9 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Vps33aQ9D2N9 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Vps33aQ9D2N9 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.38
Vps33aQ9D2N9 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Vps33aQ9D2N9 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Vps33aQ9D2N9 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Vps33aQ9D2N9 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Vps33aQ9D2N9 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Vps33aQ9D2N9 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Vps33aQ9D2N9 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Vps33aQ9D2N9 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Vps33aQ9D2N9 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Vps33aQ9D2N9 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Vps33aQ9D2N9 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Vps33aQ9D2N9 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Vps33aQ9D2N9 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Vps33aQ9D2N9 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Vps33aQ9D2N9 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Vps33aQ9D2N9 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Vps33aQ9D2N9 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Vps33aQ9D2N9 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Vps33aQ9D2N9 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Vps33aQ9D2N9 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Vps33aQ9D2N9 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Vps33aQ9D2N9 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Vps33aQ9D2N9 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Vps33aQ9D2N9 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Vps33aQ9D2N9 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Vps33aQ9D2N9 BC037039-201ENSMUST00000192003 2205 ntBASIC17.44■□□□□ 0.38
Vps33aQ9D2N9 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Vps33aQ9D2N9 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Vps33aQ9D2N9 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Vps33aQ9D2N9 CT010444.2-201ENSMUST00000217877 1629 ntBASIC17.44■□□□□ 0.38
Vps33aQ9D2N9 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC17.44■□□□□ 0.38
Vps33aQ9D2N9 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Vps33aQ9D2N9 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC17.44■□□□□ 0.38
Vps33aQ9D2N9 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Vps33aQ9D2N9 Gm6420-201ENSMUST00000193885 723 ntBASIC17.44■□□□□ 0.38
Vps33aQ9D2N9 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Vps33aQ9D2N9 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Vps33aQ9D2N9 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Vps33aQ9D2N9 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Vps33aQ9D2N9 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Vps33aQ9D2N9 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC17.44■□□□□ 0.38
Vps33aQ9D2N9 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
Vps33aQ9D2N9 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Vps33aQ9D2N9 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Vps33aQ9D2N9 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Vps33aQ9D2N9 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Vps33aQ9D2N9 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vps33aQ9D2N9 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Vps33aQ9D2N9 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vps33aQ9D2N9 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vps33aQ9D2N9 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vps33aQ9D2N9 Gm45133-201ENSMUST00000207548 2773 ntBASIC17.43■□□□□ 0.38
Vps33aQ9D2N9 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vps33aQ9D2N9 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vps33aQ9D2N9 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Vps33aQ9D2N9 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vps33aQ9D2N9 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Vps33aQ9D2N9 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Vps33aQ9D2N9 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC17.43■□□□□ 0.38
Vps33aQ9D2N9 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Vps33aQ9D2N9 Nespas-201ENSMUST00000143738 1083 ntBASIC17.43■□□□□ 0.38
Vps33aQ9D2N9 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vps33aQ9D2N9 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vps33aQ9D2N9 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Vps33aQ9D2N9 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vps33aQ9D2N9 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Vps33aQ9D2N9 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Vps33aQ9D2N9 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Vps33aQ9D2N9 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vps33aQ9D2N9 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC17.42■□□□□ 0.38
Vps33aQ9D2N9 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vps33aQ9D2N9 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vps33aQ9D2N9 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Vps33aQ9D2N9 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Vps33aQ9D2N9 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vps33aQ9D2N9 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vps33aQ9D2N9 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vps33aQ9D2N9 Gm2399-201ENSMUST00000104944 225 ntBASIC17.42■□□□□ 0.38
Vps33aQ9D2N9 Gm18671-201ENSMUST00000214826 683 ntBASIC17.42■□□□□ 0.38
Vps33aQ9D2N9 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Vps33aQ9D2N9 Wnt10b-205ENSMUST00000226846 1204 ntBASIC17.42■□□□□ 0.38
Vps33aQ9D2N9 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vps33aQ9D2N9 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms