Protein–RNA interactions for Protein: Q9D071

Mms19, MMS19 nucleotide excision repair protein homolog, mousemouse

Predictions only

Length 1,031 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mms19Q9D071 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Mms19Q9D071 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.56■□□□□ 0.4
Mms19Q9D071 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Mms19Q9D071 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Mms19Q9D071 Gm14859-201ENSMUST00000117752 357 ntBASIC17.56■□□□□ 0.4
Mms19Q9D071 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC17.56■□□□□ 0.4
Mms19Q9D071 Gm7284-201ENSMUST00000131667 944 ntBASIC17.56■□□□□ 0.4
Mms19Q9D071 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC17.56■□□□□ 0.4
Mms19Q9D071 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
Mms19Q9D071 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Mms19Q9D071 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Mms19Q9D071 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Mms19Q9D071 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
Mms19Q9D071 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Mms19Q9D071 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Mms19Q9D071 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Mms19Q9D071 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC17.56■□□□□ 0.4
Mms19Q9D071 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
Mms19Q9D071 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Mms19Q9D071 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Mms19Q9D071 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Mms19Q9D071 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Mms19Q9D071 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Mms19Q9D071 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.55■□□□□ 0.4
Mms19Q9D071 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC17.55■□□□□ 0.4
Mms19Q9D071 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Mms19Q9D071 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Mms19Q9D071 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC17.55■□□□□ 0.4
Mms19Q9D071 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Mms19Q9D071 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Mms19Q9D071 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Mms19Q9D071 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Mms19Q9D071 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Mms19Q9D071 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Mms19Q9D071 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Mms19Q9D071 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Mms19Q9D071 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Mms19Q9D071 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Mms19Q9D071 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Mms19Q9D071 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Mms19Q9D071 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Mms19Q9D071 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Mms19Q9D071 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Mms19Q9D071 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Mms19Q9D071 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Mms19Q9D071 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Mms19Q9D071 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Mms19Q9D071 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Mms19Q9D071 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Mms19Q9D071 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Mms19Q9D071 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Mms19Q9D071 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Mms19Q9D071 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC17.54■□□□□ 0.4
Mms19Q9D071 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Mms19Q9D071 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC17.54■□□□□ 0.4
Mms19Q9D071 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Mms19Q9D071 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC17.54■□□□□ 0.4
Mms19Q9D071 Gm29707-201ENSMUST00000196325 491 ntBASIC17.54■□□□□ 0.4
Mms19Q9D071 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Mms19Q9D071 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Mms19Q9D071 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Mms19Q9D071 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Mms19Q9D071 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Mms19Q9D071 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Mms19Q9D071 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Mms19Q9D071 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Mms19Q9D071 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Mms19Q9D071 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Mms19Q9D071 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Mms19Q9D071 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Mms19Q9D071 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Mms19Q9D071 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Mms19Q9D071 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Mms19Q9D071 Gm45328-201ENSMUST00000210942 917 ntBASIC17.53■□□□□ 0.4
Mms19Q9D071 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Mms19Q9D071 AC130713.1-201ENSMUST00000228853 1096 ntBASIC17.53■□□□□ 0.4
Mms19Q9D071 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Mms19Q9D071 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Mms19Q9D071 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Mms19Q9D071 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Mms19Q9D071 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Mms19Q9D071 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Mms19Q9D071 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Mms19Q9D071 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Mms19Q9D071 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Mms19Q9D071 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Mms19Q9D071 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
Mms19Q9D071 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Mms19Q9D071 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Mms19Q9D071 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Mms19Q9D071 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Mms19Q9D071 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Mms19Q9D071 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Mms19Q9D071 Gm36858-201ENSMUST00000194501 2391 ntBASIC17.52■□□□□ 0.39
Mms19Q9D071 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Mms19Q9D071 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Mms19Q9D071 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Mms19Q9D071 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Mms19Q9D071 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Mms19Q9D071 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms