Protein–RNA interactions for Protein: Q9CZN7

Shmt2, Serine hydroxymethyltransferase, mousemouse

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt2Q9CZN7 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Shmt2Q9CZN7 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Shmt2Q9CZN7 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Shmt2Q9CZN7 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Shmt2Q9CZN7 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Shmt2Q9CZN7 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Shmt2Q9CZN7 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Shmt2Q9CZN7 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Shmt2Q9CZN7 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Shmt2Q9CZN7 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Shmt2Q9CZN7 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Shmt2Q9CZN7 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Shmt2Q9CZN7 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Shmt2Q9CZN7 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Shmt2Q9CZN7 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC15.69■□□□□ 0.1
Shmt2Q9CZN7 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Shmt2Q9CZN7 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC15.69■□□□□ 0.1
Shmt2Q9CZN7 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Shmt2Q9CZN7 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC15.69■□□□□ 0.1
Shmt2Q9CZN7 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Shmt2Q9CZN7 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Shmt2Q9CZN7 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Shmt2Q9CZN7 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Shmt2Q9CZN7 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Shmt2Q9CZN7 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Shmt2Q9CZN7 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
Shmt2Q9CZN7 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Shmt2Q9CZN7 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Shmt2Q9CZN7 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Shmt2Q9CZN7 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Shmt2Q9CZN7 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Shmt2Q9CZN7 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC15.68■□□□□ 0.1
Shmt2Q9CZN7 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Shmt2Q9CZN7 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Shmt2Q9CZN7 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Shmt2Q9CZN7 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Shmt2Q9CZN7 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Shmt2Q9CZN7 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Shmt2Q9CZN7 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Shmt2Q9CZN7 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
Shmt2Q9CZN7 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC15.68■□□□□ 0.1
Shmt2Q9CZN7 Gm18958-201ENSMUST00000174258 762 ntBASIC15.68■□□□□ 0.1
Shmt2Q9CZN7 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC15.68■□□□□ 0.1
Shmt2Q9CZN7 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Shmt2Q9CZN7 Gm9987-201ENSMUST00000069768 567 ntBASIC15.68■□□□□ 0.1
Shmt2Q9CZN7 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Shmt2Q9CZN7 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Shmt2Q9CZN7 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Shmt2Q9CZN7 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Shmt2Q9CZN7 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Shmt2Q9CZN7 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Shmt2Q9CZN7 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Shmt2Q9CZN7 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Shmt2Q9CZN7 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Shmt2Q9CZN7 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Shmt2Q9CZN7 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Shmt2Q9CZN7 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Shmt2Q9CZN7 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC15.67■□□□□ 0.1
Shmt2Q9CZN7 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Shmt2Q9CZN7 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Shmt2Q9CZN7 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Shmt2Q9CZN7 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Shmt2Q9CZN7 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Shmt2Q9CZN7 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Shmt2Q9CZN7 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Shmt2Q9CZN7 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Shmt2Q9CZN7 Gm13836-201ENSMUST00000121159 501 ntBASIC15.67■□□□□ 0.1
Shmt2Q9CZN7 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Shmt2Q9CZN7 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Shmt2Q9CZN7 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Shmt2Q9CZN7 Gm45058-201ENSMUST00000205810 766 ntBASIC15.67■□□□□ 0.1
Shmt2Q9CZN7 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Shmt2Q9CZN7 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Shmt2Q9CZN7 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC15.67■□□□□ 0.1
Shmt2Q9CZN7 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Shmt2Q9CZN7 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC15.67■□□□□ 0.1
Shmt2Q9CZN7 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Shmt2Q9CZN7 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Shmt2Q9CZN7 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Shmt2Q9CZN7 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Shmt2Q9CZN7 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Shmt2Q9CZN7 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Shmt2Q9CZN7 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Shmt2Q9CZN7 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Shmt2Q9CZN7 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Shmt2Q9CZN7 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Shmt2Q9CZN7 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Shmt2Q9CZN7 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Shmt2Q9CZN7 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Shmt2Q9CZN7 Gm45212-201ENSMUST00000205831 3403 ntBASIC15.66■□□□□ 0.1
Shmt2Q9CZN7 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Shmt2Q9CZN7 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC15.66■□□□□ 0.1
Shmt2Q9CZN7 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC15.66■□□□□ 0.1
Shmt2Q9CZN7 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Shmt2Q9CZN7 Mir5130-201ENSMUST00000175160 84 ntBASIC15.66■□□□□ 0.1
Shmt2Q9CZN7 Gm4217-201ENSMUST00000182243 1002 ntBASIC15.66■□□□□ 0.1
Shmt2Q9CZN7 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC15.66■□□□□ 0.1
Shmt2Q9CZN7 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
Shmt2Q9CZN7 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Shmt2Q9CZN7 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms