Protein–RNA interactions for Protein: Q9CWS1

Rnf135, E3 ubiquitin-protein ligase RNF135, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf135Q9CWS1 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf135Q9CWS1 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf135Q9CWS1 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf135Q9CWS1 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Rnf135Q9CWS1 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf135Q9CWS1 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf135Q9CWS1 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf135Q9CWS1 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf135Q9CWS1 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC17.11■□□□□ 0.33
Rnf135Q9CWS1 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Rnf135Q9CWS1 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf135Q9CWS1 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC17.11■□□□□ 0.33
Rnf135Q9CWS1 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf135Q9CWS1 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf135Q9CWS1 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf135Q9CWS1 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Rnf135Q9CWS1 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC17.1■□□□□ 0.33
Rnf135Q9CWS1 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf135Q9CWS1 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf135Q9CWS1 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf135Q9CWS1 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Rnf135Q9CWS1 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf135Q9CWS1 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf135Q9CWS1 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC17.1■□□□□ 0.33
Rnf135Q9CWS1 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf135Q9CWS1 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC17.1■□□□□ 0.33
Rnf135Q9CWS1 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf135Q9CWS1 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Rnf135Q9CWS1 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Rnf135Q9CWS1 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf135Q9CWS1 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf135Q9CWS1 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf135Q9CWS1 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf135Q9CWS1 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf135Q9CWS1 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC17.09■□□□□ 0.33
Rnf135Q9CWS1 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf135Q9CWS1 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf135Q9CWS1 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Rnf135Q9CWS1 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf135Q9CWS1 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf135Q9CWS1 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf135Q9CWS1 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Rnf135Q9CWS1 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf135Q9CWS1 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf135Q9CWS1 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf135Q9CWS1 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf135Q9CWS1 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf135Q9CWS1 Gm6728-201ENSMUST00000178117 1065 ntBASIC17.09■□□□□ 0.33
Rnf135Q9CWS1 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf135Q9CWS1 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC17.09■□□□□ 0.33
Rnf135Q9CWS1 Gfra2-202ENSMUST00000227633 1480 ntBASIC17.09■□□□□ 0.33
Rnf135Q9CWS1 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC17.09■□□□□ 0.33
Rnf135Q9CWS1 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Rnf135Q9CWS1 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf135Q9CWS1 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Rnf135Q9CWS1 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf135Q9CWS1 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf135Q9CWS1 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf135Q9CWS1 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf135Q9CWS1 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf135Q9CWS1 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf135Q9CWS1 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf135Q9CWS1 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf135Q9CWS1 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf135Q9CWS1 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf135Q9CWS1 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rnf135Q9CWS1 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rnf135Q9CWS1 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rnf135Q9CWS1 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rnf135Q9CWS1 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Rnf135Q9CWS1 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rnf135Q9CWS1 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Rnf135Q9CWS1 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rnf135Q9CWS1 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC17.08■□□□□ 0.32
Rnf135Q9CWS1 Gm4217-201ENSMUST00000182243 1002 ntBASIC17.08■□□□□ 0.32
Rnf135Q9CWS1 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC17.08■□□□□ 0.32
Rnf135Q9CWS1 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Rnf135Q9CWS1 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rnf135Q9CWS1 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rnf135Q9CWS1 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Rnf135Q9CWS1 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rnf135Q9CWS1 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf135Q9CWS1 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf135Q9CWS1 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf135Q9CWS1 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf135Q9CWS1 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf135Q9CWS1 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf135Q9CWS1 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC17.07■□□□□ 0.32
Rnf135Q9CWS1 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC17.07■□□□□ 0.32
Rnf135Q9CWS1 Gm23634-201ENSMUST00000175071 91 ntBASIC17.07■□□□□ 0.32
Rnf135Q9CWS1 Gm27463-201ENSMUST00000183569 57 ntBASIC17.07■□□□□ 0.32
Rnf135Q9CWS1 Gm43353-201ENSMUST00000199224 1295 ntBASIC17.07■□□□□ 0.32
Rnf135Q9CWS1 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf135Q9CWS1 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf135Q9CWS1 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf135Q9CWS1 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf135Q9CWS1 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Rnf135Q9CWS1 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf135Q9CWS1 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf135Q9CWS1 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms