Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdh15Q99PJ1 Gm13365-201ENSMUST00000121188 973 ntBASIC18.54■□□□□ 0.56
Pcdh15Q99PJ1 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdh15Q99PJ1 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC18.54■□□□□ 0.56
Pcdh15Q99PJ1 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdh15Q99PJ1 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC18.54■□□□□ 0.56
Pcdh15Q99PJ1 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdh15Q99PJ1 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdh15Q99PJ1 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdh15Q99PJ1 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdh15Q99PJ1 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC18.54■□□□□ 0.56
Pcdh15Q99PJ1 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Pcdh15Q99PJ1 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdh15Q99PJ1 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdh15Q99PJ1 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdh15Q99PJ1 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdh15Q99PJ1 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdh15Q99PJ1 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Pcdh15Q99PJ1 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC18.53■□□□□ 0.56
Pcdh15Q99PJ1 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC18.53■□□□□ 0.56
Pcdh15Q99PJ1 Gm43474-201ENSMUST00000196415 774 ntBASIC18.53■□□□□ 0.56
Pcdh15Q99PJ1 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdh15Q99PJ1 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Pcdh15Q99PJ1 Nrn1-204ENSMUST00000224323 1779 ntBASIC18.53■□□□□ 0.56
Pcdh15Q99PJ1 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdh15Q99PJ1 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdh15Q99PJ1 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdh15Q99PJ1 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdh15Q99PJ1 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdh15Q99PJ1 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdh15Q99PJ1 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC18.53■□□□□ 0.56
Pcdh15Q99PJ1 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdh15Q99PJ1 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdh15Q99PJ1 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Pcdh15Q99PJ1 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC18.53■□□□□ 0.56
Pcdh15Q99PJ1 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.56
Pcdh15Q99PJ1 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdh15Q99PJ1 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.56
Pcdh15Q99PJ1 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Pcdh15Q99PJ1 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdh15Q99PJ1 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdh15Q99PJ1 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdh15Q99PJ1 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdh15Q99PJ1 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Pcdh15Q99PJ1 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Pcdh15Q99PJ1 Gm38318-201ENSMUST00000195769 1706 ntBASIC18.51■□□□□ 0.55
Pcdh15Q99PJ1 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Pcdh15Q99PJ1 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdh15Q99PJ1 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC18.51■□□□□ 0.55
Pcdh15Q99PJ1 AC140375.2-201ENSMUST00000225283 584 ntBASIC18.51■□□□□ 0.55
Pcdh15Q99PJ1 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdh15Q99PJ1 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdh15Q99PJ1 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdh15Q99PJ1 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdh15Q99PJ1 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdh15Q99PJ1 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdh15Q99PJ1 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdh15Q99PJ1 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdh15Q99PJ1 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdh15Q99PJ1 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
Pcdh15Q99PJ1 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdh15Q99PJ1 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC18.51■□□□□ 0.55
Pcdh15Q99PJ1 Gm5626-201ENSMUST00000222151 1058 ntBASIC18.51■□□□□ 0.55
Pcdh15Q99PJ1 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdh15Q99PJ1 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
Pcdh15Q99PJ1 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdh15Q99PJ1 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Pcdh15Q99PJ1 AC119177.1-201ENSMUST00000227647 1332 ntBASIC18.5■□□□□ 0.55
Pcdh15Q99PJ1 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdh15Q99PJ1 Gm37194-201ENSMUST00000193092 3031 ntBASIC18.5■□□□□ 0.55
Pcdh15Q99PJ1 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Pcdh15Q99PJ1 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC18.5■□□□□ 0.55
Pcdh15Q99PJ1 Gm12428-201ENSMUST00000119844 727 ntBASIC18.5■□□□□ 0.55
Pcdh15Q99PJ1 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdh15Q99PJ1 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC18.5■□□□□ 0.55
Pcdh15Q99PJ1 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC18.5■□□□□ 0.55
Pcdh15Q99PJ1 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdh15Q99PJ1 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdh15Q99PJ1 Gm13294-201ENSMUST00000121757 1330 ntBASIC18.5■□□□□ 0.55
Pcdh15Q99PJ1 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC18.5■□□□□ 0.55
Pcdh15Q99PJ1 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdh15Q99PJ1 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdh15Q99PJ1 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdh15Q99PJ1 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdh15Q99PJ1 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdh15Q99PJ1 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC18.49■□□□□ 0.55
Pcdh15Q99PJ1 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC18.49■□□□□ 0.55
Pcdh15Q99PJ1 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdh15Q99PJ1 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC18.49■□□□□ 0.55
Pcdh15Q99PJ1 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdh15Q99PJ1 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Pcdh15Q99PJ1 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdh15Q99PJ1 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdh15Q99PJ1 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdh15Q99PJ1 Gm5366-201ENSMUST00000215494 1338 ntBASIC18.49■□□□□ 0.55
Pcdh15Q99PJ1 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Pcdh15Q99PJ1 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC18.49■□□□□ 0.55
Pcdh15Q99PJ1 Gm27622-201ENSMUST00000183779 60 ntBASIC18.49■□□□□ 0.55
Pcdh15Q99PJ1 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdh15Q99PJ1 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms