Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
Msh4Q99MT2 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Msh4Q99MT2 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC16■□□□□ 0.15
Msh4Q99MT2 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Msh4Q99MT2 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Msh4Q99MT2 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Msh4Q99MT2 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
Msh4Q99MT2 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC16■□□□□ 0.15
Msh4Q99MT2 Gm6728-201ENSMUST00000178117 1065 ntBASIC16■□□□□ 0.15
Msh4Q99MT2 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC16■□□□□ 0.15
Msh4Q99MT2 Gm21559-201ENSMUST00000220638 855 ntBASIC16■□□□□ 0.15
Msh4Q99MT2 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Msh4Q99MT2 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Msh4Q99MT2 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Msh4Q99MT2 Gm8587-201ENSMUST00000076538 843 ntBASIC16■□□□□ 0.15
Msh4Q99MT2 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Msh4Q99MT2 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC16■□□□□ 0.15
Msh4Q99MT2 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Msh4Q99MT2 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Msh4Q99MT2 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC16■□□□□ 0.15
Msh4Q99MT2 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Msh4Q99MT2 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Msh4Q99MT2 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC16■□□□□ 0.15
Msh4Q99MT2 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Msh4Q99MT2 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Msh4Q99MT2 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Msh4Q99MT2 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Msh4Q99MT2 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC15.99■□□□□ 0.15
Msh4Q99MT2 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Msh4Q99MT2 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Msh4Q99MT2 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC15.99■□□□□ 0.15
Msh4Q99MT2 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Msh4Q99MT2 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Msh4Q99MT2 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
Msh4Q99MT2 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
Msh4Q99MT2 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Msh4Q99MT2 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC15.99■□□□□ 0.15
Msh4Q99MT2 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Msh4Q99MT2 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
Msh4Q99MT2 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Msh4Q99MT2 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Msh4Q99MT2 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Msh4Q99MT2 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Msh4Q99MT2 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Msh4Q99MT2 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Msh4Q99MT2 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Msh4Q99MT2 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Msh4Q99MT2 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Msh4Q99MT2 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
Msh4Q99MT2 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Msh4Q99MT2 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Msh4Q99MT2 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Msh4Q99MT2 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Msh4Q99MT2 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Msh4Q99MT2 AC154855.1-201ENSMUST00000227353 1458 ntBASIC15.98■□□□□ 0.15
Msh4Q99MT2 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Msh4Q99MT2 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Msh4Q99MT2 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Msh4Q99MT2 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Msh4Q99MT2 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Msh4Q99MT2 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Msh4Q99MT2 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Msh4Q99MT2 AA414768-201ENSMUST00000121924 1257 ntBASIC15.98■□□□□ 0.15
Msh4Q99MT2 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Msh4Q99MT2 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC15.98■□□□□ 0.15
Msh4Q99MT2 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Msh4Q99MT2 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC15.98■□□□□ 0.15
Msh4Q99MT2 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Msh4Q99MT2 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Msh4Q99MT2 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Msh4Q99MT2 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Msh4Q99MT2 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Msh4Q99MT2 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Msh4Q99MT2 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Msh4Q99MT2 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Msh4Q99MT2 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Msh4Q99MT2 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Msh4Q99MT2 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Msh4Q99MT2 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Msh4Q99MT2 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC15.97■□□□□ 0.15
Msh4Q99MT2 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Msh4Q99MT2 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Msh4Q99MT2 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Msh4Q99MT2 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Msh4Q99MT2 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Msh4Q99MT2 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Msh4Q99MT2 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Msh4Q99MT2 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Msh4Q99MT2 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC15.97■□□□□ 0.15
Msh4Q99MT2 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Msh4Q99MT2 Gm3272-201ENSMUST00000181181 1229 ntBASIC15.97■□□□□ 0.15
Msh4Q99MT2 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC15.97■□□□□ 0.15
Msh4Q99MT2 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC15.97■□□□□ 0.15
Msh4Q99MT2 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Msh4Q99MT2 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Msh4Q99MT2 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC15.97■□□□□ 0.15
Msh4Q99MT2 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Msh4Q99MT2 Gm10566-201ENSMUST00000086739 996 ntBASIC15.97■□□□□ 0.15
Msh4Q99MT2 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Msh4Q99MT2 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms