Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
RtcbQ99LF4 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RtcbQ99LF4 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RtcbQ99LF4 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RtcbQ99LF4 Gm43808-201ENSMUST00000202534 2065 ntBASIC20.22■□□□□ 0.83
RtcbQ99LF4 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RtcbQ99LF4 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RtcbQ99LF4 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC20.22■□□□□ 0.83
RtcbQ99LF4 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC20.22■□□□□ 0.83
RtcbQ99LF4 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RtcbQ99LF4 Gm36967-201ENSMUST00000193814 266 ntBASIC20.22■□□□□ 0.83
RtcbQ99LF4 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
RtcbQ99LF4 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC20.22■□□□□ 0.83
RtcbQ99LF4 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC20.22■□□□□ 0.83
RtcbQ99LF4 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
RtcbQ99LF4 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
RtcbQ99LF4 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC20.22■□□□□ 0.83
RtcbQ99LF4 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC20.22■□□□□ 0.83
RtcbQ99LF4 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
RtcbQ99LF4 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RtcbQ99LF4 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
RtcbQ99LF4 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC20.22■□□□□ 0.83
RtcbQ99LF4 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RtcbQ99LF4 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RtcbQ99LF4 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RtcbQ99LF4 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RtcbQ99LF4 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
RtcbQ99LF4 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RtcbQ99LF4 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC20.21■□□□□ 0.83
RtcbQ99LF4 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RtcbQ99LF4 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
RtcbQ99LF4 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RtcbQ99LF4 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
RtcbQ99LF4 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RtcbQ99LF4 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC20.21■□□□□ 0.83
RtcbQ99LF4 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RtcbQ99LF4 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RtcbQ99LF4 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RtcbQ99LF4 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RtcbQ99LF4 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RtcbQ99LF4 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RtcbQ99LF4 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RtcbQ99LF4 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RtcbQ99LF4 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.83
RtcbQ99LF4 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
RtcbQ99LF4 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
RtcbQ99LF4 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RtcbQ99LF4 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RtcbQ99LF4 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC20.2■□□□□ 0.82
RtcbQ99LF4 Gm15920-201ENSMUST00000118998 402 ntBASIC20.2■□□□□ 0.82
RtcbQ99LF4 Gm11764-201ENSMUST00000120221 623 ntBASIC20.2■□□□□ 0.82
RtcbQ99LF4 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
RtcbQ99LF4 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
RtcbQ99LF4 Chchd1-203ENSMUST00000224633 557 ntBASIC20.2■□□□□ 0.82
RtcbQ99LF4 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC20.2■□□□□ 0.82
RtcbQ99LF4 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RtcbQ99LF4 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
RtcbQ99LF4 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC20.19■□□□□ 0.82
RtcbQ99LF4 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RtcbQ99LF4 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RtcbQ99LF4 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RtcbQ99LF4 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC20.19■□□□□ 0.82
RtcbQ99LF4 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC20.19■□□□□ 0.82
RtcbQ99LF4 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RtcbQ99LF4 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC20.19■□□□□ 0.82
RtcbQ99LF4 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RtcbQ99LF4 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RtcbQ99LF4 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RtcbQ99LF4 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RtcbQ99LF4 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
RtcbQ99LF4 Gm11873-201ENSMUST00000117877 1304 ntBASIC20.19■□□□□ 0.82
RtcbQ99LF4 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RtcbQ99LF4 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RtcbQ99LF4 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RtcbQ99LF4 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
RtcbQ99LF4 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RtcbQ99LF4 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RtcbQ99LF4 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RtcbQ99LF4 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
RtcbQ99LF4 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
RtcbQ99LF4 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
RtcbQ99LF4 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RtcbQ99LF4 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC20.18■□□□□ 0.82
RtcbQ99LF4 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
RtcbQ99LF4 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RtcbQ99LF4 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC20.18■□□□□ 0.82
RtcbQ99LF4 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
RtcbQ99LF4 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC20.18■□□□□ 0.82
RtcbQ99LF4 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
RtcbQ99LF4 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
RtcbQ99LF4 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RtcbQ99LF4 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
RtcbQ99LF4 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
RtcbQ99LF4 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RtcbQ99LF4 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RtcbQ99LF4 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RtcbQ99LF4 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RtcbQ99LF4 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RtcbQ99LF4 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC20.17■□□□□ 0.82
RtcbQ99LF4 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC20.17■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms