Protein–RNA interactions for Protein: Q91Y17

Pcdha2, Protocadherin alpha 2, mousemouse

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha2Q91Y17 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdha2Q91Y17 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC17.47■□□□□ 0.39
Pcdha2Q91Y17 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC17.47■□□□□ 0.39
Pcdha2Q91Y17 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Pcdha2Q91Y17 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC17.47■□□□□ 0.39
Pcdha2Q91Y17 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdha2Q91Y17 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdha2Q91Y17 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdha2Q91Y17 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Pcdha2Q91Y17 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdha2Q91Y17 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdha2Q91Y17 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdha2Q91Y17 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdha2Q91Y17 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdha2Q91Y17 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdha2Q91Y17 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdha2Q91Y17 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdha2Q91Y17 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC17.47■□□□□ 0.39
Pcdha2Q91Y17 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdha2Q91Y17 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdha2Q91Y17 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.47■□□□□ 0.39
Pcdha2Q91Y17 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdha2Q91Y17 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdha2Q91Y17 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdha2Q91Y17 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdha2Q91Y17 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdha2Q91Y17 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdha2Q91Y17 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdha2Q91Y17 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdha2Q91Y17 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdha2Q91Y17 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Pcdha2Q91Y17 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdha2Q91Y17 Mir3081-201ENSMUST00000175305 84 ntBASIC17.46■□□□□ 0.39
Pcdha2Q91Y17 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC17.46■□□□□ 0.39
Pcdha2Q91Y17 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdha2Q91Y17 AC115863.1-201ENSMUST00000214815 1813 ntBASIC17.46■□□□□ 0.39
Pcdha2Q91Y17 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdha2Q91Y17 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdha2Q91Y17 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Pcdha2Q91Y17 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdha2Q91Y17 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.38
Pcdha2Q91Y17 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
Pcdha2Q91Y17 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Pcdha2Q91Y17 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdha2Q91Y17 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdha2Q91Y17 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdha2Q91Y17 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
Pcdha2Q91Y17 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdha2Q91Y17 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC17.45■□□□□ 0.38
Pcdha2Q91Y17 AC153794.1-201ENSMUST00000169148 126 ntBASIC17.45■□□□□ 0.38
Pcdha2Q91Y17 Gm17807-201ENSMUST00000186869 298 ntBASIC17.45■□□□□ 0.38
Pcdha2Q91Y17 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdha2Q91Y17 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdha2Q91Y17 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdha2Q91Y17 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdha2Q91Y17 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdha2Q91Y17 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdha2Q91Y17 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdha2Q91Y17 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdha2Q91Y17 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdha2Q91Y17 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdha2Q91Y17 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdha2Q91Y17 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdha2Q91Y17 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdha2Q91Y17 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdha2Q91Y17 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdha2Q91Y17 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdha2Q91Y17 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdha2Q91Y17 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdha2Q91Y17 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC17.44■□□□□ 0.38
Pcdha2Q91Y17 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC17.44■□□□□ 0.38
Pcdha2Q91Y17 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdha2Q91Y17 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdha2Q91Y17 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC17.44■□□□□ 0.38
Pcdha2Q91Y17 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC17.44■□□□□ 0.38
Pcdha2Q91Y17 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdha2Q91Y17 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.44■□□□□ 0.38
Pcdha2Q91Y17 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdha2Q91Y17 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Pcdha2Q91Y17 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdha2Q91Y17 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Pcdha2Q91Y17 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdha2Q91Y17 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdha2Q91Y17 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Pcdha2Q91Y17 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdha2Q91Y17 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdha2Q91Y17 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdha2Q91Y17 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdha2Q91Y17 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdha2Q91Y17 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdha2Q91Y17 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdha2Q91Y17 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.43■□□□□ 0.38
Pcdha2Q91Y17 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.43■□□□□ 0.38
Pcdha2Q91Y17 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC17.43■□□□□ 0.38
Pcdha2Q91Y17 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdha2Q91Y17 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdha2Q91Y17 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Pcdha2Q91Y17 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.43■□□□□ 0.38
Pcdha2Q91Y17 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdha2Q91Y17 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms