Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Pcdha9Q91Y11 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdha9Q91Y11 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdha9Q91Y11 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC17.45■□□□□ 0.38
Pcdha9Q91Y11 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdha9Q91Y11 AC125350.1-201ENSMUST00000225115 903 ntBASIC17.45■□□□□ 0.38
Pcdha9Q91Y11 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdha9Q91Y11 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdha9Q91Y11 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdha9Q91Y11 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
Pcdha9Q91Y11 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdha9Q91Y11 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdha9Q91Y11 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdha9Q91Y11 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdha9Q91Y11 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdha9Q91Y11 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdha9Q91Y11 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdha9Q91Y11 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Pcdha9Q91Y11 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdha9Q91Y11 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Pcdha9Q91Y11 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Pcdha9Q91Y11 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdha9Q91Y11 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdha9Q91Y11 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdha9Q91Y11 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
Pcdha9Q91Y11 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdha9Q91Y11 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdha9Q91Y11 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Pcdha9Q91Y11 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC17.44■□□□□ 0.38
Pcdha9Q91Y11 Ighv6-1-201ENSMUST00000193612 343 ntBASIC17.44■□□□□ 0.38
Pcdha9Q91Y11 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdha9Q91Y11 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdha9Q91Y11 Gm32996-201ENSMUST00000199828 1447 ntBASIC17.44■□□□□ 0.38
Pcdha9Q91Y11 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdha9Q91Y11 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Pcdha9Q91Y11 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC17.44■□□□□ 0.38
Pcdha9Q91Y11 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdha9Q91Y11 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdha9Q91Y11 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdha9Q91Y11 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdha9Q91Y11 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Pcdha9Q91Y11 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
Pcdha9Q91Y11 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdha9Q91Y11 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdha9Q91Y11 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
Pcdha9Q91Y11 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdha9Q91Y11 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdha9Q91Y11 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdha9Q91Y11 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdha9Q91Y11 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdha9Q91Y11 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdha9Q91Y11 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdha9Q91Y11 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdha9Q91Y11 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdha9Q91Y11 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC17.43■□□□□ 0.38
Pcdha9Q91Y11 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Pcdha9Q91Y11 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdha9Q91Y11 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdha9Q91Y11 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdha9Q91Y11 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdha9Q91Y11 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdha9Q91Y11 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC17.43■□□□□ 0.38
Pcdha9Q91Y11 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdha9Q91Y11 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdha9Q91Y11 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdha9Q91Y11 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdha9Q91Y11 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdha9Q91Y11 AC115863.1-201ENSMUST00000214815 1813 ntBASIC17.42■□□□□ 0.38
Pcdha9Q91Y11 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdha9Q91Y11 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdha9Q91Y11 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Pcdha9Q91Y11 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdha9Q91Y11 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdha9Q91Y11 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdha9Q91Y11 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdha9Q91Y11 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdha9Q91Y11 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC17.42■□□□□ 0.38
Pcdha9Q91Y11 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Pcdha9Q91Y11 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdha9Q91Y11 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdha9Q91Y11 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Pcdha9Q91Y11 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdha9Q91Y11 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdha9Q91Y11 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdha9Q91Y11 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdha9Q91Y11 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdha9Q91Y11 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Pcdha9Q91Y11 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Pcdha9Q91Y11 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdha9Q91Y11 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdha9Q91Y11 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdha9Q91Y11 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdha9Q91Y11 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Pcdha9Q91Y11 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Pcdha9Q91Y11 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Pcdha9Q91Y11 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdha9Q91Y11 Gm33142-201ENSMUST00000193913 867 ntBASIC17.41■□□□□ 0.38
Pcdha9Q91Y11 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC17.41■□□□□ 0.38
Pcdha9Q91Y11 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC17.41■□□□□ 0.38
Pcdha9Q91Y11 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms