Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhga4Q91XY4 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhga4Q91XY4 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhga4Q91XY4 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhga4Q91XY4 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhga4Q91XY4 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhga4Q91XY4 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhga4Q91XY4 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhga4Q91XY4 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhga4Q91XY4 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Pcdhga4Q91XY4 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhga4Q91XY4 Gm27000-201ENSMUST00000182943 842 ntBASIC16.17■□□□□ 0.18
Pcdhga4Q91XY4 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhga4Q91XY4 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC16.17■□□□□ 0.18
Pcdhga4Q91XY4 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
Pcdhga4Q91XY4 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Pcdhga4Q91XY4 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Pcdhga4Q91XY4 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhga4Q91XY4 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Pcdhga4Q91XY4 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhga4Q91XY4 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhga4Q91XY4 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhga4Q91XY4 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhga4Q91XY4 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhga4Q91XY4 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhga4Q91XY4 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Pcdhga4Q91XY4 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhga4Q91XY4 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhga4Q91XY4 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhga4Q91XY4 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhga4Q91XY4 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhga4Q91XY4 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhga4Q91XY4 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC16.16■□□□□ 0.18
Pcdhga4Q91XY4 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC16.16■□□□□ 0.18
Pcdhga4Q91XY4 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhga4Q91XY4 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Pcdhga4Q91XY4 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhga4Q91XY4 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Pcdhga4Q91XY4 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC16.16■□□□□ 0.18
Pcdhga4Q91XY4 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhga4Q91XY4 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhga4Q91XY4 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhga4Q91XY4 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Pcdhga4Q91XY4 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhga4Q91XY4 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Pcdhga4Q91XY4 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC16.16■□□□□ 0.18
Pcdhga4Q91XY4 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhga4Q91XY4 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhga4Q91XY4 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhga4Q91XY4 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhga4Q91XY4 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Pcdhga4Q91XY4 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Pcdhga4Q91XY4 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Pcdhga4Q91XY4 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC16.15■□□□□ 0.18
Pcdhga4Q91XY4 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhga4Q91XY4 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC16.15■□□□□ 0.18
Pcdhga4Q91XY4 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC16.15■□□□□ 0.18
Pcdhga4Q91XY4 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Pcdhga4Q91XY4 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhga4Q91XY4 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhga4Q91XY4 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhga4Q91XY4 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhga4Q91XY4 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhga4Q91XY4 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhga4Q91XY4 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Pcdhga4Q91XY4 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhga4Q91XY4 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhga4Q91XY4 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhga4Q91XY4 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhga4Q91XY4 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhga4Q91XY4 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Pcdhga4Q91XY4 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC16.15■□□□□ 0.18
Pcdhga4Q91XY4 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Pcdhga4Q91XY4 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Pcdhga4Q91XY4 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhga4Q91XY4 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.18
Pcdhga4Q91XY4 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
Pcdhga4Q91XY4 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Pcdhga4Q91XY4 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhga4Q91XY4 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhga4Q91XY4 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Pcdhga4Q91XY4 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhga4Q91XY4 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhga4Q91XY4 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhga4Q91XY4 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhga4Q91XY4 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhga4Q91XY4 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhga4Q91XY4 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC16.14■□□□□ 0.17
Pcdhga4Q91XY4 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhga4Q91XY4 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhga4Q91XY4 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhga4Q91XY4 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhga4Q91XY4 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhga4Q91XY4 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhga4Q91XY4 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC16.14■□□□□ 0.17
Pcdhga4Q91XY4 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhga4Q91XY4 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhga4Q91XY4 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhga4Q91XY4 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhga4Q91XY4 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms