Protein–RNA interactions for Protein: Q91XX6

Pcdhgb4, Protocadherin gamma B4, mousemouse

Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb4Q91XX6 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Pcdhgb4Q91XX6 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Pcdhgb4Q91XX6 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhgb4Q91XX6 Slc35b2-202ENSMUST00000223987 1766 ntBASIC17.4■□□□□ 0.38
Pcdhgb4Q91XX6 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhgb4Q91XX6 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhgb4Q91XX6 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Pcdhgb4Q91XX6 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhgb4Q91XX6 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Pcdhgb4Q91XX6 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
Pcdhgb4Q91XX6 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Pcdhgb4Q91XX6 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Pcdhgb4Q91XX6 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Pcdhgb4Q91XX6 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhgb4Q91XX6 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC17.39■□□□□ 0.37
Pcdhgb4Q91XX6 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhgb4Q91XX6 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhgb4Q91XX6 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhgb4Q91XX6 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhgb4Q91XX6 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC17.39■□□□□ 0.37
Pcdhgb4Q91XX6 Gm13474-201ENSMUST00000122466 815 ntBASIC17.39■□□□□ 0.37
Pcdhgb4Q91XX6 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC17.39■□□□□ 0.37
Pcdhgb4Q91XX6 Mir6982-201ENSMUST00000184354 68 ntBASIC17.39■□□□□ 0.37
Pcdhgb4Q91XX6 Gm44450-201ENSMUST00000199528 114 ntBASIC17.39■□□□□ 0.37
Pcdhgb4Q91XX6 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhgb4Q91XX6 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhgb4Q91XX6 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhgb4Q91XX6 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhgb4Q91XX6 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhgb4Q91XX6 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC17.39■□□□□ 0.37
Pcdhgb4Q91XX6 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhgb4Q91XX6 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhgb4Q91XX6 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhgb4Q91XX6 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhgb4Q91XX6 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhgb4Q91XX6 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhgb4Q91XX6 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhgb4Q91XX6 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhgb4Q91XX6 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhgb4Q91XX6 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC17.38■□□□□ 0.37
Pcdhgb4Q91XX6 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC17.38■□□□□ 0.37
Pcdhgb4Q91XX6 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC17.38■□□□□ 0.37
Pcdhgb4Q91XX6 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC17.38■□□□□ 0.37
Pcdhgb4Q91XX6 Gm18115-201ENSMUST00000221209 621 ntBASIC17.38■□□□□ 0.37
Pcdhgb4Q91XX6 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhgb4Q91XX6 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhgb4Q91XX6 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhgb4Q91XX6 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhgb4Q91XX6 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhgb4Q91XX6 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhgb4Q91XX6 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhgb4Q91XX6 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhgb4Q91XX6 Zfp264-201ENSMUST00000208656 1563 ntBASIC17.37■□□□□ 0.37
Pcdhgb4Q91XX6 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Pcdhgb4Q91XX6 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhgb4Q91XX6 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhgb4Q91XX6 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhgb4Q91XX6 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhgb4Q91XX6 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhgb4Q91XX6 Mir5130-201ENSMUST00000175160 84 ntBASIC17.37■□□□□ 0.37
Pcdhgb4Q91XX6 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhgb4Q91XX6 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Pcdhgb4Q91XX6 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhgb4Q91XX6 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC17.37■□□□□ 0.37
Pcdhgb4Q91XX6 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhgb4Q91XX6 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhgb4Q91XX6 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhgb4Q91XX6 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhgb4Q91XX6 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhgb4Q91XX6 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Pcdhgb4Q91XX6 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhgb4Q91XX6 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhgb4Q91XX6 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhgb4Q91XX6 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhgb4Q91XX6 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhgb4Q91XX6 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhgb4Q91XX6 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Pcdhgb4Q91XX6 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhgb4Q91XX6 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhgb4Q91XX6 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC17.36■□□□□ 0.37
Pcdhgb4Q91XX6 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhgb4Q91XX6 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC17.36■□□□□ 0.37
Pcdhgb4Q91XX6 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhgb4Q91XX6 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhgb4Q91XX6 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC17.36■□□□□ 0.37
Pcdhgb4Q91XX6 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC17.36■□□□□ 0.37
Pcdhgb4Q91XX6 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Pcdhgb4Q91XX6 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
Pcdhgb4Q91XX6 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhgb4Q91XX6 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhgb4Q91XX6 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhgb4Q91XX6 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhgb4Q91XX6 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhgb4Q91XX6 Gm8668-201ENSMUST00000120559 1447 ntBASIC17.36■□□□□ 0.37
Pcdhgb4Q91XX6 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhgb4Q91XX6 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhgb4Q91XX6 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhgb4Q91XX6 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Pcdhgb4Q91XX6 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhgb4Q91XX6 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms