Protein–RNA interactions for Protein: Q91VD8

Pcdhb17, MCG141290, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb17Q91VD8 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.05■□□□□ 0.32
Pcdhb17Q91VD8 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb17Q91VD8 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC17.05■□□□□ 0.32
Pcdhb17Q91VD8 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb17Q91VD8 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC17.05■□□□□ 0.32
Pcdhb17Q91VD8 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC17.05■□□□□ 0.32
Pcdhb17Q91VD8 Gm29107-201ENSMUST00000190910 347 ntBASIC17.05■□□□□ 0.32
Pcdhb17Q91VD8 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb17Q91VD8 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb17Q91VD8 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb17Q91VD8 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb17Q91VD8 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb17Q91VD8 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb17Q91VD8 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Pcdhb17Q91VD8 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb17Q91VD8 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb17Q91VD8 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb17Q91VD8 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb17Q91VD8 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb17Q91VD8 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC17.04■□□□□ 0.32
Pcdhb17Q91VD8 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb17Q91VD8 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb17Q91VD8 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Pcdhb17Q91VD8 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb17Q91VD8 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb17Q91VD8 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb17Q91VD8 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb17Q91VD8 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb17Q91VD8 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb17Q91VD8 Gm12467-201ENSMUST00000117625 745 ntBASIC17.04■□□□□ 0.32
Pcdhb17Q91VD8 Gm13333-201ENSMUST00000119424 781 ntBASIC17.04■□□□□ 0.32
Pcdhb17Q91VD8 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC17.04■□□□□ 0.32
Pcdhb17Q91VD8 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb17Q91VD8 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb17Q91VD8 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC17.04■□□□□ 0.32
Pcdhb17Q91VD8 Bud31-203ENSMUST00000160075 928 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Pcdhb17Q91VD8 AC154471.1-201ENSMUST00000224418 436 ntBASIC17.04■□□□□ 0.32
Pcdhb17Q91VD8 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb17Q91VD8 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb17Q91VD8 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb17Q91VD8 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb17Q91VD8 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb17Q91VD8 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb17Q91VD8 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb17Q91VD8 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb17Q91VD8 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb17Q91VD8 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb17Q91VD8 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Pcdhb17Q91VD8 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb17Q91VD8 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb17Q91VD8 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb17Q91VD8 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb17Q91VD8 Slc35b2-202ENSMUST00000223987 1766 ntBASIC17.03■□□□□ 0.32
Pcdhb17Q91VD8 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb17Q91VD8 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb17Q91VD8 Gm15442-201ENSMUST00000117905 1527 ntBASIC17.03■□□□□ 0.32
Pcdhb17Q91VD8 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
Pcdhb17Q91VD8 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Pcdhb17Q91VD8 Gm9723-201ENSMUST00000192100 457 ntBASIC17.03■□□□□ 0.32
Pcdhb17Q91VD8 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC17.03■□□□□ 0.32
Pcdhb17Q91VD8 Olfr258-ps1-202ENSMUST00000218625 1085 ntTSL 5 BASIC17.03■□□□□ 0.32
Pcdhb17Q91VD8 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb17Q91VD8 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb17Q91VD8 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb17Q91VD8 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb17Q91VD8 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb17Q91VD8 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC17.03■□□□□ 0.32
Pcdhb17Q91VD8 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Pcdhb17Q91VD8 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC17.03■□□□□ 0.32
Pcdhb17Q91VD8 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb17Q91VD8 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb17Q91VD8 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC17.03■□□□□ 0.32
Pcdhb17Q91VD8 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb17Q91VD8 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb17Q91VD8 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhb17Q91VD8 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhb17Q91VD8 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhb17Q91VD8 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhb17Q91VD8 Gm43553-201ENSMUST00000200900 685 ntBASIC17.02■□□□□ 0.32
Pcdhb17Q91VD8 Gm45328-201ENSMUST00000210942 917 ntBASIC17.02■□□□□ 0.32
Pcdhb17Q91VD8 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhb17Q91VD8 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhb17Q91VD8 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhb17Q91VD8 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Pcdhb17Q91VD8 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Pcdhb17Q91VD8 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Pcdhb17Q91VD8 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Pcdhb17Q91VD8 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Pcdhb17Q91VD8 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Pcdhb17Q91VD8 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
Pcdhb17Q91VD8 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb17Q91VD8 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb17Q91VD8 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Pcdhb17Q91VD8 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb17Q91VD8 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb17Q91VD8 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC17.01■□□□□ 0.31
Pcdhb17Q91VD8 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb17Q91VD8 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb17Q91VD8 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb17Q91VD8 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms