Protein–RNA interactions for Protein: Q8VHY0

Cspg4, Chondroitin sulfate proteoglycan 4, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4Q8VHY0 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC14.08□□□□□ -0.16
Cspg4Q8VHY0 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Cspg4Q8VHY0 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Cspg4Q8VHY0 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC14.08□□□□□ -0.16
Cspg4Q8VHY0 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cspg4Q8VHY0 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Cspg4Q8VHY0 Gm9172-201ENSMUST00000212092 954 ntBASIC14.08□□□□□ -0.16
Cspg4Q8VHY0 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cspg4Q8VHY0 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cspg4Q8VHY0 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Cspg4Q8VHY0 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC14.08□□□□□ -0.16
Cspg4Q8VHY0 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cspg4Q8VHY0 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cspg4Q8VHY0 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cspg4Q8VHY0 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Cspg4Q8VHY0 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cspg4Q8VHY0 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC14.07□□□□□ -0.16
Cspg4Q8VHY0 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC14.07□□□□□ -0.16
Cspg4Q8VHY0 AC174742.1-201ENSMUST00000218272 304 ntBASIC14.07□□□□□ -0.16
Cspg4Q8VHY0 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC14.07□□□□□ -0.16
Cspg4Q8VHY0 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cspg4Q8VHY0 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cspg4Q8VHY0 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cspg4Q8VHY0 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cspg4Q8VHY0 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cspg4Q8VHY0 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cspg4Q8VHY0 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cspg4Q8VHY0 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cspg4Q8VHY0 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC14.07□□□□□ -0.16
Cspg4Q8VHY0 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Cspg4Q8VHY0 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cspg4Q8VHY0 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cspg4Q8VHY0 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cspg4Q8VHY0 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
Cspg4Q8VHY0 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cspg4Q8VHY0 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cspg4Q8VHY0 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cspg4Q8VHY0 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Cspg4Q8VHY0 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cspg4Q8VHY0 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Cspg4Q8VHY0 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cspg4Q8VHY0 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cspg4Q8VHY0 Gm45203-201ENSMUST00000206384 1831 ntBASIC14.06□□□□□ -0.16
Cspg4Q8VHY0 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Cspg4Q8VHY0 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cspg4Q8VHY0 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cspg4Q8VHY0 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC14.06□□□□□ -0.16
Cspg4Q8VHY0 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Cspg4Q8VHY0 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cspg4Q8VHY0 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC14.06□□□□□ -0.16
Cspg4Q8VHY0 Gm4459-201ENSMUST00000118750 468 ntBASIC14.06□□□□□ -0.16
Cspg4Q8VHY0 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC14.06□□□□□ -0.16
Cspg4Q8VHY0 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC14.06□□□□□ -0.16
Cspg4Q8VHY0 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC14.06□□□□□ -0.16
Cspg4Q8VHY0 Gfra2-202ENSMUST00000227633 1480 ntBASIC14.06□□□□□ -0.16
Cspg4Q8VHY0 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cspg4Q8VHY0 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cspg4Q8VHY0 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cspg4Q8VHY0 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
Cspg4Q8VHY0 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cspg4Q8VHY0 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cspg4Q8VHY0 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cspg4Q8VHY0 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC14.05□□□□□ -0.16
Cspg4Q8VHY0 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cspg4Q8VHY0 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cspg4Q8VHY0 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cspg4Q8VHY0 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cspg4Q8VHY0 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Cspg4Q8VHY0 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cspg4Q8VHY0 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cspg4Q8VHY0 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cspg4Q8VHY0 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Cspg4Q8VHY0 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cspg4Q8VHY0 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cspg4Q8VHY0 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC14.04□□□□□ -0.16
Cspg4Q8VHY0 Gm44945-201ENSMUST00000206764 1187 ntBASIC14.04□□□□□ -0.16
Cspg4Q8VHY0 AC124549.3-201ENSMUST00000225541 367 ntBASIC14.04□□□□□ -0.16
Cspg4Q8VHY0 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cspg4Q8VHY0 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cspg4Q8VHY0 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cspg4Q8VHY0 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC14.04□□□□□ -0.16
Cspg4Q8VHY0 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Cspg4Q8VHY0 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cspg4Q8VHY0 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cspg4Q8VHY0 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cspg4Q8VHY0 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cspg4Q8VHY0 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cspg4Q8VHY0 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cspg4Q8VHY0 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cspg4Q8VHY0 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cspg4Q8VHY0 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC14.04□□□□□ -0.16
Cspg4Q8VHY0 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cspg4Q8VHY0 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cspg4Q8VHY0 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC14.04□□□□□ -0.16
Cspg4Q8VHY0 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cspg4Q8VHY0 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cspg4Q8VHY0 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cspg4Q8VHY0 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cspg4Q8VHY0 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC14.04□□□□□ -0.16
Cspg4Q8VHY0 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms