Protein–RNA interactions for Protein: Q8VDS4

Rprd1a, Regulation of nuclear pre-mRNA domain-containing protein 1A, mousemouse

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rprd1aQ8VDS4 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rprd1aQ8VDS4 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rprd1aQ8VDS4 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Rprd1aQ8VDS4 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rprd1aQ8VDS4 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rprd1aQ8VDS4 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Rprd1aQ8VDS4 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rprd1aQ8VDS4 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Rprd1aQ8VDS4 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rprd1aQ8VDS4 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rprd1aQ8VDS4 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC16.88■□□□□ 0.29
Rprd1aQ8VDS4 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC16.88■□□□□ 0.29
Rprd1aQ8VDS4 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rprd1aQ8VDS4 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rprd1aQ8VDS4 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rprd1aQ8VDS4 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Rprd1aQ8VDS4 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rprd1aQ8VDS4 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Rprd1aQ8VDS4 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rprd1aQ8VDS4 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rprd1aQ8VDS4 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rprd1aQ8VDS4 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Rprd1aQ8VDS4 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Rprd1aQ8VDS4 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rprd1aQ8VDS4 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rprd1aQ8VDS4 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rprd1aQ8VDS4 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rprd1aQ8VDS4 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Rprd1aQ8VDS4 Gm36858-201ENSMUST00000194501 2391 ntBASIC16.87■□□□□ 0.29
Rprd1aQ8VDS4 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC16.87■□□□□ 0.29
Rprd1aQ8VDS4 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rprd1aQ8VDS4 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
Rprd1aQ8VDS4 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rprd1aQ8VDS4 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Rprd1aQ8VDS4 Gm9867-201ENSMUST00000192212 2647 ntBASIC16.87■□□□□ 0.29
Rprd1aQ8VDS4 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rprd1aQ8VDS4 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rprd1aQ8VDS4 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC16.87■□□□□ 0.29
Rprd1aQ8VDS4 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rprd1aQ8VDS4 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rprd1aQ8VDS4 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Rprd1aQ8VDS4 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Rprd1aQ8VDS4 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rprd1aQ8VDS4 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Rprd1aQ8VDS4 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rprd1aQ8VDS4 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rprd1aQ8VDS4 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Rprd1aQ8VDS4 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Rprd1aQ8VDS4 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rprd1aQ8VDS4 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Rprd1aQ8VDS4 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rprd1aQ8VDS4 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC16.86■□□□□ 0.29
Rprd1aQ8VDS4 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Rprd1aQ8VDS4 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Rprd1aQ8VDS4 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC16.86■□□□□ 0.29
Rprd1aQ8VDS4 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC16.86■□□□□ 0.29
Rprd1aQ8VDS4 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rprd1aQ8VDS4 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Rprd1aQ8VDS4 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rprd1aQ8VDS4 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Rprd1aQ8VDS4 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rprd1aQ8VDS4 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rprd1aQ8VDS4 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rprd1aQ8VDS4 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rprd1aQ8VDS4 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rprd1aQ8VDS4 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rprd1aQ8VDS4 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC16.85■□□□□ 0.29
Rprd1aQ8VDS4 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Rprd1aQ8VDS4 Ighv6-1-201ENSMUST00000193612 343 ntBASIC16.85■□□□□ 0.29
Rprd1aQ8VDS4 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Rprd1aQ8VDS4 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rprd1aQ8VDS4 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rprd1aQ8VDS4 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rprd1aQ8VDS4 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC16.85■□□□□ 0.29
Rprd1aQ8VDS4 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC16.85■□□□□ 0.29
Rprd1aQ8VDS4 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rprd1aQ8VDS4 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rprd1aQ8VDS4 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Rprd1aQ8VDS4 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Rprd1aQ8VDS4 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
Rprd1aQ8VDS4 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Rprd1aQ8VDS4 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Rprd1aQ8VDS4 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Rprd1aQ8VDS4 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rprd1aQ8VDS4 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rprd1aQ8VDS4 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rprd1aQ8VDS4 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rprd1aQ8VDS4 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rprd1aQ8VDS4 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Rprd1aQ8VDS4 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rprd1aQ8VDS4 Gm27742-201ENSMUST00000184667 60 ntBASIC16.84■□□□□ 0.29
Rprd1aQ8VDS4 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rprd1aQ8VDS4 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rprd1aQ8VDS4 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rprd1aQ8VDS4 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rprd1aQ8VDS4 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rprd1aQ8VDS4 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rprd1aQ8VDS4 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
Rprd1aQ8VDS4 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Rprd1aQ8VDS4 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms