Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Vps39Q8R5L3 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Vps39Q8R5L3 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC16.46■□□□□ 0.23
Vps39Q8R5L3 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Vps39Q8R5L3 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Vps39Q8R5L3 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Vps39Q8R5L3 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Vps39Q8R5L3 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Vps39Q8R5L3 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Vps39Q8R5L3 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Vps39Q8R5L3 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Vps39Q8R5L3 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vps39Q8R5L3 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vps39Q8R5L3 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vps39Q8R5L3 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vps39Q8R5L3 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vps39Q8R5L3 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vps39Q8R5L3 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Vps39Q8R5L3 Gm16061-201ENSMUST00000122167 857 ntBASIC16.45■□□□□ 0.22
Vps39Q8R5L3 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Vps39Q8R5L3 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC16.45■□□□□ 0.22
Vps39Q8R5L3 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC16.45■□□□□ 0.22
Vps39Q8R5L3 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vps39Q8R5L3 Gm18115-201ENSMUST00000221209 621 ntBASIC16.45■□□□□ 0.22
Vps39Q8R5L3 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vps39Q8R5L3 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vps39Q8R5L3 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vps39Q8R5L3 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Vps39Q8R5L3 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Vps39Q8R5L3 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vps39Q8R5L3 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vps39Q8R5L3 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC16.45■□□□□ 0.22
Vps39Q8R5L3 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vps39Q8R5L3 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vps39Q8R5L3 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vps39Q8R5L3 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Vps39Q8R5L3 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Vps39Q8R5L3 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vps39Q8R5L3 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vps39Q8R5L3 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Vps39Q8R5L3 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Vps39Q8R5L3 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Vps39Q8R5L3 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Vps39Q8R5L3 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Vps39Q8R5L3 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
Vps39Q8R5L3 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Vps39Q8R5L3 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Vps39Q8R5L3 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Vps39Q8R5L3 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Vps39Q8R5L3 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Vps39Q8R5L3 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Vps39Q8R5L3 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Vps39Q8R5L3 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC16.44■□□□□ 0.22
Vps39Q8R5L3 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Vps39Q8R5L3 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Vps39Q8R5L3 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Vps39Q8R5L3 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Vps39Q8R5L3 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Vps39Q8R5L3 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
Vps39Q8R5L3 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC16.44■□□□□ 0.22
Vps39Q8R5L3 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Vps39Q8R5L3 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Vps39Q8R5L3 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Vps39Q8R5L3 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Vps39Q8R5L3 AC115863.1-201ENSMUST00000214815 1813 ntBASIC16.44■□□□□ 0.22
Vps39Q8R5L3 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Vps39Q8R5L3 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Vps39Q8R5L3 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Vps39Q8R5L3 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Vps39Q8R5L3 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Vps39Q8R5L3 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Vps39Q8R5L3 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Vps39Q8R5L3 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Vps39Q8R5L3 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Vps39Q8R5L3 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Vps39Q8R5L3 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC16.43■□□□□ 0.22
Vps39Q8R5L3 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Vps39Q8R5L3 Phf7-203ENSMUST00000226565 1971 ntBASIC16.43■□□□□ 0.22
Vps39Q8R5L3 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC16.43■□□□□ 0.22
Vps39Q8R5L3 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Vps39Q8R5L3 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Vps39Q8R5L3 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Vps39Q8R5L3 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Vps39Q8R5L3 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Vps39Q8R5L3 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Vps39Q8R5L3 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC16.43■□□□□ 0.22
Vps39Q8R5L3 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Vps39Q8R5L3 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Vps39Q8R5L3 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Vps39Q8R5L3 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Vps39Q8R5L3 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Vps39Q8R5L3 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
Vps39Q8R5L3 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Vps39Q8R5L3 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Vps39Q8R5L3 Gm37055-201ENSMUST00000191866 133 ntBASIC16.42■□□□□ 0.22
Vps39Q8R5L3 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC16.42■□□□□ 0.22
Vps39Q8R5L3 Gm7370-201ENSMUST00000219471 767 ntBASIC16.42■□□□□ 0.22
Vps39Q8R5L3 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Vps39Q8R5L3 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Vps39Q8R5L3 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms