Protein–RNA interactions for Protein: Q8R0S1

Atf7, Cyclic AMP-dependent transcription factor ATF-7, mousemouse

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf7Q8R0S1 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
Atf7Q8R0S1 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Atf7Q8R0S1 Gm15442-201ENSMUST00000117905 1527 ntBASIC19.4■□□□□ 0.7
Atf7Q8R0S1 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Atf7Q8R0S1 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Atf7Q8R0S1 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Atf7Q8R0S1 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Atf7Q8R0S1 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Atf7Q8R0S1 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Atf7Q8R0S1 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Atf7Q8R0S1 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Atf7Q8R0S1 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Atf7Q8R0S1 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Atf7Q8R0S1 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC19.39■□□□□ 0.69
Atf7Q8R0S1 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Atf7Q8R0S1 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Atf7Q8R0S1 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Atf7Q8R0S1 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Atf7Q8R0S1 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC19.39■□□□□ 0.69
Atf7Q8R0S1 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC19.39■□□□□ 0.69
Atf7Q8R0S1 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC19.39■□□□□ 0.69
Atf7Q8R0S1 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC19.39■□□□□ 0.69
Atf7Q8R0S1 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Atf7Q8R0S1 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Atf7Q8R0S1 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Atf7Q8R0S1 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC19.39■□□□□ 0.69
Atf7Q8R0S1 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Atf7Q8R0S1 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Atf7Q8R0S1 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
Atf7Q8R0S1 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Atf7Q8R0S1 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Atf7Q8R0S1 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Atf7Q8R0S1 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Atf7Q8R0S1 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Atf7Q8R0S1 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Atf7Q8R0S1 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Atf7Q8R0S1 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Atf7Q8R0S1 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Atf7Q8R0S1 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Atf7Q8R0S1 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC19.38■□□□□ 0.69
Atf7Q8R0S1 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Atf7Q8R0S1 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Atf7Q8R0S1 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Atf7Q8R0S1 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Atf7Q8R0S1 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
Atf7Q8R0S1 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Atf7Q8R0S1 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Atf7Q8R0S1 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Atf7Q8R0S1 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Atf7Q8R0S1 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC19.37■□□□□ 0.69
Atf7Q8R0S1 Gm10013-201ENSMUST00000106074 672 ntBASIC19.37■□□□□ 0.69
Atf7Q8R0S1 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Atf7Q8R0S1 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Atf7Q8R0S1 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC19.37■□□□□ 0.69
Atf7Q8R0S1 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC19.37■□□□□ 0.69
Atf7Q8R0S1 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Atf7Q8R0S1 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Atf7Q8R0S1 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Atf7Q8R0S1 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Atf7Q8R0S1 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Atf7Q8R0S1 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Atf7Q8R0S1 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Atf7Q8R0S1 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Atf7Q8R0S1 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Atf7Q8R0S1 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Atf7Q8R0S1 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Atf7Q8R0S1 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Atf7Q8R0S1 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Atf7Q8R0S1 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Atf7Q8R0S1 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Atf7Q8R0S1 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC19.36■□□□□ 0.69
Atf7Q8R0S1 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Atf7Q8R0S1 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Atf7Q8R0S1 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Atf7Q8R0S1 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Atf7Q8R0S1 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
Atf7Q8R0S1 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Atf7Q8R0S1 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Atf7Q8R0S1 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Atf7Q8R0S1 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Atf7Q8R0S1 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Atf7Q8R0S1 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Atf7Q8R0S1 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Atf7Q8R0S1 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Atf7Q8R0S1 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Atf7Q8R0S1 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Atf7Q8R0S1 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Atf7Q8R0S1 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Atf7Q8R0S1 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Atf7Q8R0S1 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Atf7Q8R0S1 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Atf7Q8R0S1 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Atf7Q8R0S1 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Atf7Q8R0S1 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Atf7Q8R0S1 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Atf7Q8R0S1 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Atf7Q8R0S1 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Atf7Q8R0S1 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC19.35■□□□□ 0.69
Atf7Q8R0S1 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Atf7Q8R0S1 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms