Protein–RNA interactions for Protein: Q8CIR4

Trpm6, Transient receptor potential cation channel subfamily M member 6, mousemouse

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpm6Q8CIR4 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC16.42■□□□□ 0.22
Trpm6Q8CIR4 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trpm6Q8CIR4 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trpm6Q8CIR4 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trpm6Q8CIR4 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trpm6Q8CIR4 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC16.42■□□□□ 0.22
Trpm6Q8CIR4 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
Trpm6Q8CIR4 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trpm6Q8CIR4 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trpm6Q8CIR4 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC16.41■□□□□ 0.22
Trpm6Q8CIR4 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Trpm6Q8CIR4 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC16.41■□□□□ 0.22
Trpm6Q8CIR4 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trpm6Q8CIR4 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trpm6Q8CIR4 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trpm6Q8CIR4 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC16.41■□□□□ 0.22
Trpm6Q8CIR4 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC16.41■□□□□ 0.22
Trpm6Q8CIR4 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trpm6Q8CIR4 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.41■□□□□ 0.22
Trpm6Q8CIR4 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trpm6Q8CIR4 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trpm6Q8CIR4 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trpm6Q8CIR4 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Trpm6Q8CIR4 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Trpm6Q8CIR4 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Trpm6Q8CIR4 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trpm6Q8CIR4 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trpm6Q8CIR4 Gm15173-201ENSMUST00000122049 433 ntBASIC16.41■□□□□ 0.22
Trpm6Q8CIR4 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC16.41■□□□□ 0.22
Trpm6Q8CIR4 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trpm6Q8CIR4 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Trpm6Q8CIR4 Gm6550-201ENSMUST00000187574 993 ntBASIC16.41■□□□□ 0.22
Trpm6Q8CIR4 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC16.41■□□□□ 0.22
Trpm6Q8CIR4 Gm18856-201ENSMUST00000178096 1374 ntBASIC16.41■□□□□ 0.22
Trpm6Q8CIR4 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trpm6Q8CIR4 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trpm6Q8CIR4 Gm11841-201ENSMUST00000117060 1963 ntBASIC16.41■□□□□ 0.22
Trpm6Q8CIR4 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trpm6Q8CIR4 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trpm6Q8CIR4 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trpm6Q8CIR4 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trpm6Q8CIR4 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trpm6Q8CIR4 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trpm6Q8CIR4 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trpm6Q8CIR4 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trpm6Q8CIR4 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trpm6Q8CIR4 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trpm6Q8CIR4 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trpm6Q8CIR4 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trpm6Q8CIR4 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trpm6Q8CIR4 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trpm6Q8CIR4 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trpm6Q8CIR4 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Trpm6Q8CIR4 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trpm6Q8CIR4 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC16.4■□□□□ 0.22
Trpm6Q8CIR4 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trpm6Q8CIR4 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC16.4■□□□□ 0.22
Trpm6Q8CIR4 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC16.4■□□□□ 0.22
Trpm6Q8CIR4 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC16.4■□□□□ 0.22
Trpm6Q8CIR4 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trpm6Q8CIR4 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Trpm6Q8CIR4 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.22
Trpm6Q8CIR4 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trpm6Q8CIR4 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trpm6Q8CIR4 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trpm6Q8CIR4 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trpm6Q8CIR4 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Trpm6Q8CIR4 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trpm6Q8CIR4 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC16.39■□□□□ 0.21
Trpm6Q8CIR4 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC16.39■□□□□ 0.21
Trpm6Q8CIR4 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trpm6Q8CIR4 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC16.39■□□□□ 0.21
Trpm6Q8CIR4 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Trpm6Q8CIR4 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trpm6Q8CIR4 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trpm6Q8CIR4 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trpm6Q8CIR4 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trpm6Q8CIR4 AC132265.1-201ENSMUST00000219233 1665 ntBASIC16.39■□□□□ 0.21
Trpm6Q8CIR4 AC154527.4-201ENSMUST00000224364 1667 ntBASIC16.39■□□□□ 0.21
Trpm6Q8CIR4 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Trpm6Q8CIR4 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trpm6Q8CIR4 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trpm6Q8CIR4 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trpm6Q8CIR4 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Trpm6Q8CIR4 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trpm6Q8CIR4 Gm43702-201ENSMUST00000198772 2546 ntBASIC16.38■□□□□ 0.21
Trpm6Q8CIR4 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trpm6Q8CIR4 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC16.38■□□□□ 0.21
Trpm6Q8CIR4 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
Trpm6Q8CIR4 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trpm6Q8CIR4 Gm6858-201ENSMUST00000208582 1468 ntBASIC16.38■□□□□ 0.21
Trpm6Q8CIR4 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trpm6Q8CIR4 Gm10461-201ENSMUST00000202073 4786 ntBASIC16.38■□□□□ 0.21
Trpm6Q8CIR4 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trpm6Q8CIR4 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trpm6Q8CIR4 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trpm6Q8CIR4 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trpm6Q8CIR4 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trpm6Q8CIR4 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trpm6Q8CIR4 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms